Coregonus clupeaformis (lake whitefish): 121535545 Help Entry 121535545         CDS       T08357                                  Name (RefSeq) collagen alpha-1(VI) chain-like   KO K06238   collagen type VI alpha Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu04510   Focal adhesion cclu04512   ECM-receptor interaction cclu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cclu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     121535545  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     121535545   09142 Cell motility    04820 Cytoskeleton in muscle cells     121535545  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cclu04147]     121535545    00536 Glycosaminoglycan binding proteins [BR:cclu00536]     121535545 Exosome [BR:cclu04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    121535545 Glycosaminoglycan binding proteins [BR:cclu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    121535545  Hyaluronan   Extracellular matrix or blood plasma proteins    121535545 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VWA Collagen VWA_2 VWA_3 DUF1194 Motif Other DBs NCBI-GeneID:  121535545 NCBI-ProteinID:  XP_041698655 LinkDB All DBs Position 21:complement(43075585..43191030) Genome browser AA seq 1011 aa AA seqDB search MEARGVLSLLCVGALFAVALAQQTSRPMFWECPVDLFFVLDTSESVALRAKPPNFYIDQI KTFTEQFIMELKEMRHPCDRSLTWNSGALHYSDEIILVRQLSDIATERQALISDIKGISY IGKGTHTDCAIKRGIAELLIGGSHYQENKYIVVVTDGHPLTGYKEPCGGLQEAANEARQH GVKVFSVAISPDQEDTRLSVIATDQSYRQNFTAADNSRSTQLQTIRSIIDMITNETKDVC CSFDCNAKGGPKGPDGNLGSKGETGRQGMPGEKGDIGEEGNLGDPGPVGYRGMKGDRGGR GDKGERGHKGYKGDKGLRGTDGVDGRKGDPGFPGLAGCKGSPGPDGSQGDGGPKGDPGPY GTKGTKGDRGKDGEPGRPGNYGPPGIKGTLGPKGANGDKGQRGDDGAPGPDGLRGNEGSP GEKGEQGSRGTRGPRGDLGDPGPRGDQGREGSSGANGDPGDIGRAGSPGYRGDEGAPGPE GPKGPRGIKGAPGDRGQIGERGEDGTPGNGTEGCHGFQGYPGPRGDVGNPGGKGTPGPKG DDGEPGDPGLDNDSPGLPGSKGAKGHRGPEGNPGPVGPPGPAGADECEILDIIMKLCSCC ECKCGPLDLAFIVDSSESIGSTNFALAKDFIITVIDRLMKDQQVRFGVNESRVGVVQYSG DGAQEAVRLGDTNINTLTELKQAVRDLRWLAEATYTGEALQFSLTNMIDRLKQENRVVLV LTDGRSDITRDITPLTTLCGKGIKVGGLGVKDYSGRQPNHEQLSAVVCESDPKPGFSFVL ENFAELLDDTFLQNLTARICEDKKCPNYKCPISFSGDTDIVVMMDSSASVGQRNFDSSKT FVKRLAERFLSAERSGRAAVRVGVGQYSRERRMEAELTSNLTLLTSKIEAAAFQNDGTDV TKAMAFAMEQLQKSGGGNRKRKLVLFSDGRSQGVTEAMLEKRVRLVSEAGVELYVITVGN QVNEANLRSLVSRGRSYDVTYAQRHLFRVPDYPSLLRGVFYQTVSRRVSQA NT seq 3036 nt NT seq  +upstreamnt  +downstreamnt atggaggctcgtggagttctctctctgctgtgcgtcggcgcgctgtttgctgtggctctg gcgcagcagaccagcagacccatgttctgggagtgtccggtggacctgttctttgtgctg gacacgtctgagagtgttgctctgagggccaagcctcccaacttttacatcgaccagatc aagacctttactgaacaattcatcatggagctcaaagagatgcgccacccatgtgaccgc tccctgacgtggaactctggagcgctgcactactctgatgagatcatcttagttcgccag ctgagtgacatcgccacggagcgccaggcgctcatcagtgacatcaagggcatcagttac atcggcaagggaacacacactgactgtgccatcaagaggggcatcgctgagctgctcata gggggctcccactaccaggagaataagtacatcgtggtggtgacggacggtcatcctcta acaggttacaaggagccctgtggtgggttacaggaggctgccaatgaggccaggcaacac ggggttaaagtcttctctgtcgccatctcacctgaccaggaggacaccagactgtcagtg attgctacagaccagagctacagacagaacttcacagcagctgacaacagcagatctacc cagctacagaccatacgcagcatcatagatatgatcaccaatgagaccaaggatgtgtgc tgttctttcgactgcaatgctaaaggaggtcccaaaggaccagacggaaacctcggctcc aagggtgaaacaggtagacaggggatgccaggcgagaagggagacatcggggaagagggg aacttgggagaccctggccctgtaggataccgtggaatgaagggcgaccgaggtggaaga ggcgacaagggcgagagaggccataaaggctacaagggagacaaaggactacgggggaca gatggagttgatggacgtaagggtgatccaggttttcctggtctagccggctgtaaaggt tctccaggacctgacggctcgcagggagacggaggtcctaagggagatcctggtccatac ggaaccaaaggaactaagggtgatcgggggaaagacggagaaccaggacgacccggtaac tacggaccgcccggaatcaagggtacactgggcccgaaaggagccaatggggacaaagga cagaggggtgatgatggtgcacctggaccggacggcctccgaggaaacgaaggctcccca ggagagaaaggagagcagggaagccgtggaaccagaggaccaagaggagatttgggtgac ccaggacctcgtggagatcagggcagagagggctcatctggagccaacggagaccctggc gacatcggcagggcgggatctccaggatacagaggagatgagggcgcccccggaccagag ggccccaaaggaccaagaggaatcaaaggagctcccggagacagaggccagatcggagag aggggagaagatggcacacctggaaatggaactgagggttgccatggtttccagggttac cccggcccacgaggagacgttggaaacccgggcgggaagggaaccccaggacccaaagga gacgatggagagcctggagaccctggcctggacaacgactccccaggactcccagggagc aaaggagccaaaggacacagaggacctgaaggaaacccgggaccagtcgggcctcccgga cctgcaggagctgatgaatgtgagattctggatatcatcatgaagctttgctcgtgctgt gagtgtaagtgtgggcctctggacctggcgttcatcgtggacagttctgagagtatcggc tccactaacttcgctctggctaaagacttcatcatcactgtcatagaccgccttatgaag gaccagcaagtccgctttggtgttaatgagtccagggtgggcgtggtgcagtacagtgga gatggagcccaggaggccgtcaggctgggagataccaacattaacacactcactgagctc aaacaggcagtgcgggacctgcgctggctggctgaggccacctatacaggggaggctctg cagttttctctgaccaacatgattgaccgtctgaagcaggagaaccgcgtggtcctagtg ctcactgacggacgctctgatatcaccagagatataacaccgctcactacactctgtgga aagggcatcaaggtgggtggtctgggggtgaaggactactctggccgtcagcccaaccat gaacagctaagtgctgtggtctgtgagagcgaccctaaaccaggcttctccttcgtactg gagaacttcgccgagctgctggatgacaccttcctacagaacctcaccgcccgcatctgt gaagataagaagtgtcccaactacaaatgtcccatctcattctcaggggacacagacatc gtggtgatgatggacagctcagccagtgtgggacagaggaactttgactccagcaagacc ttcgtcaagcgtctggctgagcgcttcctgtctgccgagaggtccggccgtgctgccgtg cgtgtaggcgtgggccagtacagccgcgaacgccgcatggaggcggagctgacctctaac ctcaccctgctgaccagtaagattgaggccgccgccttccagaacgatgggactgacgtt accaaggcgatggccttcgccatggagcaattacagaagtcagggggcggaaacaggaag aggaagctggtgctgttctctgacgggagatcgcagggcgttaccgaggcgatgctggag aagcgcgtgcggttggtgtcggaggcgggagtggagctgtacgttatcaccgtgggcaac caggtgaacgaggccaacctgcgctcgctggtcagcagggggaggagttacgacgtcacc tacgcccagcgccacctgttccgcgtcccagactacccgtctctgctgcgtggcgtgttc taccagaccgtgtcccgcagggtctcccaggcctga

DBGET integrated database retrieval system