Coregonus clupeaformis (lake whitefish): 121535577
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Entry
121535577 CDS
T08357
Name
(RefSeq) protein zyg-11 homolog
KO
K10350
Zyg-11 protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121535577
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
121535577
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_4
LRR_Zer-1
LRR_8
ARM_ARMC5
ARM_UBP24_USP9X-Y
LRR_EndoS
ELMO_ARM
Motif
Other DBs
NCBI-GeneID:
121535577
NCBI-ProteinID:
XP_041698716
LinkDB
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Position
21:complement(51310500..51332948)
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AA seq
768 aa
AA seq
DB search
MILQSDGKYLYLKNKKMAEESCPVALSELCLAQVCLSLDSLCSTQPDGSLRLSWAPLLPQ
EMADQLLHKMATQGTLNDRTVGIFRSCEQLRLRRACIRSSPLSAEAFRLALCPHRLQELD
ASRVPGGLTGAHILSGLASNPECRASLQRLTLSRLQMGWKSMEVEEGQVGFSSLQGLKIL
NLANTDLTDPLLEDICTLPQLEGLDISSTPVMELSALLGCRFTLRSLTAHGLRQLDMSPA
RVISILSQLHALRHLDLSDDRFASAPPSAEDDEWGEGDEAVRLLLEGGSGVLPALVSLDV
SGRKKVTEGAVTAFVEGRSGLVFLGLLATGAGSCDVLSGKDNLKVTGEANEKQICESLRR
YRERECFTREALVHLYQLTNDMYDQTRPDILKLVLGGMQNHSESLPVQLVASACVFNLTN
QDMAVGMPHPLLSAVVHQVLEAMRSFPSHQQLQKNCLLVLCSDTILQDVPFDRFEAAKLV
MNWLSGHVDRTLQRMAVAVISILVAKLSTQQTTQLGADIFIMKQLLGIVQQKAMAGVVDS
TLKFALSALWNLTDETPTASRHFIQCQGLELYEEVLESYSSESSIQQKVLGLLNNIAEVE
ELQADMMEEDLLEHVVTLLQGPQVEVGVSYFAGGILAHLTSRQDAWTLDQGLRQTILEQM
HAAILTWALPEREMVSYRSFRPFFSLLQTSQPAGVQLWAVWAMRLVCTQNGVQYCHMLQE
DGAVELLNTLSSDLDTHSDVRGMAESILGMVEHHQTASNPLRTQPAIP
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgatattgcaaagtgatgggaaatatttgtatttaaaaaacaaaaaaatggctgaggag
tcctgtcccgtggccctgtctgagctgtgtctggcccaggtgtgtctcagcctggactcc
ctctgcagcacgcaaccagatggctccctgaggctcagctgggccccactgctcccacag
gaaatggctgatcagctactgcacaagatggctacccagggcacgctaaacgacagaaca
gtcggtatcttccgcagctgtgaacaactccgtctgcgcagagcttgtatccgctcctct
cccctctctgcagaggccttccgtctggccctctgccctcaccggttgcaggagctggat
gcttcccgggtccctgggggcctcactggggcccacatcctctcaggcctggcctccaac
ccggagtgcagagccagcctgcagaggctcacactgagcaggctccagatgggctggaag
tccatggaggtggaggaagggcaggtgggcttcagctctctgcagggcctgaagatactc
aacctggctaacacggacctcacagaccccctcctggaggacatctgtactctcccacag
ctagagggcctggacatctccagcacccccgtcatggagctgagtgccctgctgggttgc
cggtttaccctgagatccctgactgcccacgggctgaggcagctggacatgtcccctgcc
agggtgatctccatccttagccagctccacgctctcaggcacctggacctctctgacgac
cgcttcgcctctgcaccgccctccgcagaggatgacgaatggggggagggggatgaagcg
gtgaggctgcttctggaggggggttctggggttctcccagcacttgtgtctctggatgtg
tctggaaggaagaaggtgactgaaggggcggtcacggccttcgtggaggggaggagtggg
ctggtgttcctggggctgctggctactggggctggctcctgtgacgttctgtctgggaag
gacaacttaaaggtgaccggcgaggccaatgagaagcagatctgtgagtctctgaggagg
tacagagagagagagtgtttcacacgcgaggccctggtccatctctaccagctgactaac
gacatgtacgaccagaccagaccagacatcctgaagctggtgttgggagggatgcagaac
cactcagagtctctccctgtccagctggtggcctcagcctgcgtcttcaacctgaccaat
caggacatggctgtgggcatgccccaccccctgctcagcgcagtcgtacatcaagtactg
gaagccatgagaagcttccccagccaccaacagttacagaagaactgcctgctggtgctc
tgcagtgacaccatccttcaggacgtcccttttgacagattcgaagcagccaagctggtg
atgaactggctcagcggtcacgtggaccggaccctgcagaggatggccgtggccgtcatc
tccatactagtggccaaactgtccacacagcagaccacacagctgggggctgatatcttt
attatgaagcagctgctgggtatagtgcaacagaaagccatggcgggagtagtggactcc
actctgaagtttgccctgagtgctctgtggaacctgactgatgagacacccactgcatcg
cgacacttcatccaatgtcagggcctggagctgtacgaggaagtgctggagtcctactcc
tctgagtcttctatacagcagaaagttctaggtcttctgaacaacatagccgaggtggag
gagctgcaggcagacatgatggaggaggacctgttggagcacgtagtgaccctgctccag
gggccccaggtggaggtgggggtcagctacttcgctgggggcatcctggcccacctcacc
tccagacaggatgcatggaccctagaccaggggctccgtcaaactatactggaacagatg
catgctgccatactgacctgggccctccctgagcgtgagatggtctcctacaggtcgttc
cggccgttcttctccctgctccagacctctcagcctgctggagtgcagctatgggctgtc
tgggctatgcgtctcgtctgcactcagaacggtgtgcagtactgccatatgctccaggag
gatggggcagtggaactcctgaataccttgtcctctgaccttgacacccacagcgacgtt
agagggatggcagagagcatcctgggtatggtggagcaccaccagactgccagcaatccc
ctgagaacacagccagcaatcccctga
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