Coregonus clupeaformis (lake whitefish): 121535613 Help Entry 121535613         CDS       T08357                                  Name (RefSeq) coatomer subunit alpha   KO K05236   coatomer subunit alpha Organism cclu  Coregonus clupeaformis (lake whitefish) Brite KEGG Orthology (KO) [BR:cclu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cclu04131]     121535613   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cclu04147]     121535613 Membrane trafficking [BR:cclu04131]  Endoplasmic reticulum (ER) - Golgi transport   Retrieval pathways    Coat protein complex I (COP-I)     121535613 Exosome [BR:cclu04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    121535613   Exosomal proteins of bladder cancer cells    121535613 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  COPI_C B-prop_COPA_B_2nd WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 TPR_COPA_B Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st ANAPC4_WD40 WD40_RFWD3 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd Motif Other DBs NCBI-GeneID:  121535613 NCBI-ProteinID:  XP_041698779 LinkDB All DBs Position 21:50783254..50802043 Genome browser AA seq 1224 aa AA seqDB search MMLTKFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDF HKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRI WNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVET DVRGISGVDLFGASDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKA WELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGA HPNLNLFAAGHDSGMLVFKLERERPAYAVYGNMLYYVKERFLRQLDFNSSKDTAVMQLRS GSKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPKESDSQNPDAPEGKRSSGLTAV WVARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADGVTLFDVQQ KRSLATVKIAKVKYVVWSADTSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESG VFIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLTIDPTEYRF KLALVNRKYEEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIE VALEAAKALDERGCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKM MKIAEIRKDMSGHYQGALYLGDVSERVRILKNCGQKSLAYLTAATHGMDEEAEALKETFD PEKETVPEVDLNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGKAGQMAADMDVDA PGGEGWGDDAELQLEEDGFMDAQDGLGEEGGAAKEEGGGWEVEEDLDLPPELELSAGAGG GVEDGFFVPPTKGMSPTQLWCNNSQLPVDHVLAGSFETAMRLLHDQVGVVQFGPYKQLFM QTLSRGRTCYLGLPSLPCLRGNPQRNWKDCGAKQGLPAVGLRLSDLIARLQQCYQLTTAG RFEEAVERFRAILLSVPLLVVDNKQEIAEAQQLITICREYIVGLTMETERKKLPKDTLDQ QKRLCEMAAYFTHCSLQPVHMVLVLRTALNLFFKLKNFKTAASFARRLLELGPKPEVAQQ TRKILAACEKTLTDAHQLNYDPHNPFDLCAASYTPLYRGRPVEKCPLSGACYCPPYKGQV CRVTQVTEIGKDVIGLRVSPLQFR NT seq 3675 nt NT seq  +upstreamnt  +downstreamnt atgatgttgaccaaattcgagacgaagtcggcccgtgtgaaagggctgagtttccaccct aagcggccctggatccttgctagtcttcacaatggagtcatccagctttgggactatcgg atgtgcacactgattgacaagttcgatgagcatgatggacctgtcagaggaattgatttc cacaagcaacagcctctgtttgtgtctggaggagatgactacaaaatcaaggtgtggaac tacaagttgcggcgttgcctcttcactcttcttggacacctggactacatccgcaccacc ttcttccatcatgagtatccatggattttgagtgcctcagatgaccagaccatccgcatc tggaactggcagtccaggacctgcgtctgtgtcctgacagggcataatcattatgtgatg tgtgctcagttccacccctctgaggacctggtggtgtcggccagcctggaccagaccgtg cgcgtgtgggatatctccggtctgaggaagaagaacctctctcccggtgctgtggaaact gatgtgcgaggcatctctggcgtcgatctgttcggagcatctgatgctgttgtcaaacac gtgctcgagggtcacgaccgtggggtcaactgggccgccttccatcccaccatgcccctc atcgtctcaggggccgacgaccggcaggtcaagatctggaggatgaacgagtccaaggcg tgggagctggacacctgcaggggccactacaacaacgtgtcctgtgctgtcttccacccc cgccaggagctcatcctgtccaactctgaggacaagagcatccgtgtatgggacatgtcc aagaggaccggtgtccagaccttccgcagggaccacgaccgcttctgggtgctgggggct caccccaacctcaatctatttgctgctggtcatgacagtggtatgctggtgtttaagctg gagcgtgagcgtccggcctatgctgtgtacggcaacatgctctactacgtcaaggaacgc ttcctgcgccagctcgactttaacagcagcaaggacactgctgtcatgcagctgcgcagt gggtcaaagttcccagtgttcagcatgtcttacaaccccgcagagaatgctgtcctgctc tgcactagggcaaccaacctggagaacagcacctatgacctgtactccattcccaaagag agcgactctcagaacccagatgctcctgaggggaagaggtcctctggtctgaccgcagtc tgggtcgcaaggaacaggtttgctgttctggaccgcatgcattctctgctgatcaagaac ctgaagaatgagattgtgaaaaaggtgcaggtgcccagctgtgaggagatcttttacgcc gggacaggctccctgctgctgcgcgacgcagacggggtcaccctctttgacgtgcagcag aaacgctctctggccaccgtgaagatcgccaaggtcaagtatgtggtgtggagcgctgac accagccacgtggccttgctggctaaacacgccattatgatctgcaacaggaagctggag agtctgtgcaacatccatgagaacatccgtgtgaagagtggagcctgggacgagagtgga gtcttcatttacaccacatctaaccacatcaaatacgccctcacctcaggtgatcatggt atcatccggactctggacctgcccatctacgtgacccgggtcagaggcaacagcgtctac tgtctggaccgtgagtgcagaccccgtgtgctgaccatcgaccccacggagtaccgcttc aaactggccctggtcaaccgcaaatatgaagaggtgctgcacatggtgcgtaacgccaag ctggttggccagtccattatcgcatacctgcagaagaagggttaccctgaggtggcgctg cacttcgtcaaggatgagaagacccgcttcagtctggctctggagtgtggcaacattgaa gtggcgttggaggctgccaaggctctggatgagcggggctgctgggaacggctaggcgag gcggcgctgcttcagggtcaccaccaggtcgtggagatgtgctaccagaggaccaagaac ttcgacaagctcaccttcctctacctcatcaccggcaacctggccaagctccgcaagatg atgaagatcgctgagatcaggaaggacatgagtggacactaccagggtgctctgtatctg ggggatgtcagcgagagagtccgcatcctgaagaactgtggccagaagtcactggcatat ctgactgctgccacccacgggatggacgaagaggcagaagccctgaaagagacctttgac ccagagaaggagactgtccctgaggtggacctcaatgcccagctgctgcagccacctcct cctatcaaccccctggataccaactggcccctgctcactgtgtccaagggcttcttcgag ggagccattgcagccaaagggaaggctggtcagatggctgcagacatggatgttgatgcc ccaggaggagagggctggggagatgacgcagagcttcagctggaggaggatggcttcatg gatgcccaggatggattaggagaggaaggaggtgcagcgaaggaggaaggaggaggctgg gaggtagaggaagatctggaccttcctccagagctggagttgtcagctggtgctggagga ggggttgaagatggtttctttgtcccgcccactaagggcatgagccccacccagctgtgg tgcaacaactcccagctccctgtggaccacgtcctggctggctcctttgagactgccatg aggttgctccatgaccaggttggggtggtgcagttcgggccctataagcagctgttcatg cagactctgtcccgcgggcggacctgctacctgggcctgccgtctctaccctgcctgcgt ggcaacccccagaggaactggaaggactgtggggccaagcaggggctgcctgccgtgggt cttcgtctctctgacctcatcgcccgcctgcagcagtgctaccagctcacaaccgccggc cgcttcgaggaagccgttgaacgattccgcgccatcctgctgtctgtgccactgctggtg gtcgacaacaagcaggagatcgcagaggctcagcagttgatcacaatctgcagagaatac attgttggcctcaccatggaaacagaaaggaagaaattgcctaaagacacattggaccag cagaagagactgtgtgagatggcagcttacttcacccactgcagtctccagccagtccac atggtcctggtcttacgcacggcactaaatctgttcttcaaactgaagaacttcaagaca gccgcaagttttgcccgtcgcttgcttgaactagggcccaaaccagaggttgcacagcag acacgcaagatcttggcagcatgcgagaagacgctgacagatgctcaccagctgaactac gacccccacaatccatttgacctgtgcgctgcctcctacacgcccctgtaccgtggacgc cccgtagagaagtgccctctgtctggagcctgctactgccccccctacaaaggccaggtc tgcagggtcacacaggtgacggagatcggaaaggatgtgattggtctgcgtgtcagcccc ctgcagttccgttag

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