Coregonus clupeaformis (lake whitefish): 121535617
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Entry
121535617 CDS
T08357
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04148
Efferocytosis
cclu04218
Cellular senescence
cclu04310
Wnt signaling pathway
cclu04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121535617 (nfatc4)
04020 Calcium signaling pathway
121535617 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121535617 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
121535617 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
121535617 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121535617 (nfatc4)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
121535617 (nfatc4)
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GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
TIG
Motif
Other DBs
NCBI-GeneID:
121535617
NCBI-ProteinID:
XP_041698782
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All DBs
Position
21:50597574..50608390
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AA seq
888 aa
AA seq
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MGAAPGSGWEEGEFEFKLVFEEDPTRQLRGPSPLCNADQEHTIVGERTESALSLLESSNT
DSHLDTTHVGQPIGIPTPPCSSASQRAGMHSPPPRRAMVREFSGTYESLPARSVQVSESR
VLECPSIQITTISPEDDTAPAGSNFWDTGGGWDRERLYLPLLDPFCYREGSTGAGSLSPS
PASSPSSRGWLSPASSCDSLLVEEEELNEVTSHFCLSPSSRPTSPGGKKRRNSPLASPCT
SRRSSYSEDHSCTLEGDDSTSQSQAPNSSFELSIPQKTRKTSLEQVSPRDVEQEQALAHS
SHCPLPEPLQQRREAASMGMDYLSVPPALGWGRTRASTHSPLFRSNALPPLDWPLPTQFD
QYELRIEVQPRPHHRAHYETEGSRGAVKASPRGHPVVKLTGYTERQPLSLQVFVGTADDR
SIRPHPFYQIHRVTGKMVGTASQESVQAGTKILDIPLNPEANMTALIDCAGILKLRNSDI
ELRKGETDVGRKNTRVRLMFRTHLPLGPPVAPPGRMLALQVTSVPIECSQRSAQELPVVE
SLSLTSCSVEGGEELLLGGSNFLPISRVLFMERGADGKLQWEEEAHVDRDNSSECLLCVQ
VPAYGDLSVNRLVSVCLYVSNGKRKRSSTHCFKYLPEEDPLLSRPSVVPLEEVTLCSMGG
PSRVDRGLHLRNDPTPEERGLALHLPPYPSAYSPPYPGHGYQEEYCHKPEAVGDSRGSLS
ERRPSFEKLELGFTELLPPLYPRVSQPPSPSPWLESPYLSSSPSPSHSSSLSPFPTGSPI
SSSPLPPMTTSPYPHYPYPQEICPSPPSNPSPYQDFYPSPYSHYEVWDHQGRGPGEREAQ
AASKMQENPLEFASSSSVHHITLEEVNEFIGEDIRSFQLGSQMDSQPG
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgggggctgcgccgggttctggttgggaggagggggagttcgagttcaagttggttttt
gaggaagacccgacgcgccaactccgaggcccatccccgctgtgcaacgcggaccaggag
cacaccatcgtgggggagaggacagagagcgccctgtcactcctagagtcgagcaatact
gacagccacctggataccactcacgtaggccagccaatcggcatccctaccccaccgtgt
tcttcagccagtcaaagggctgggatgcattccccgccccccagacgtgccatggtgagg
gagttcagtgggacctatgagagccttcctgcgagatctgtacaggtgtcagagtcccgt
gtgttggagtgccctagcatccagatcaccactatctccccagaggatgacactgcccca
gcaggaagtaacttctgggacacagggggtggatgggacagggagcgcctctaccttccc
ctactggacccattctgctaccgcgaaggcagcaccggcgctgggtccctgagcccaagc
cctgcctccagcccctcctctcggggctggctcagtcctgcgtccagctgtgattcgctg
ctggtggaggaggaggagctcaatgaggtcacctcacatttctgcctatcaccctcctcc
cggcccacctcgccggggggtaagaagcgcaggaactcccctctggcctccccctgcacg
tcccgcaggagcagctactctgaggaccactcctgtaccctggagggtgacgactccacc
tctcagtcacaggctcccaacagcagctttgagctgagcattccacagaaaactaggaag
acgtcactggagcaagtctcccccagggatgtggagcaggagcaggctctagcccatagc
tcccactgcccactgccagagccgctgcagcagaggagagaggctgcatccatgggcatg
gactacctgtctgtgccccctgctctgggctgggggaggactagagccagcacccacagc
cctctgttcagatccaatgctctgccgccacttgattggccactgccaactcagtttgac
caatatgagttgcgtattgaggtgcagccccgcccacaccaccgagcccactacgagaca
gaaggaagcagaggagccgtcaaggcatcaccaaggggacatccggttgttaagctgact
gggtacacagagagacagccactctctttgcaggtgtttgtgggaacagctgatgacagg
tccatccggcctcatcctttctatcagatacacagggtgacaggtaagatggtgggtact
gccagtcaagagagtgtacaggctggcaccaaaatactggacatccccctcaacccagag
gccaacatgactgccctcattgactgcgctggcattctgaagctgaggaattcggacatc
gagctgaggaaaggagagacggacgtagggaggaaaaacactcgtgtgcgcctaatgttc
cgtacccacctcccccttggccctcccgtggccccgcctggacggatgctggccctgcag
gtcacctctgtgcctatagagtgctcccagcgctctgctcaagagctgccagtggtggag
tcgctcagtctcacatcgtgctctgtggaaggaggggaggagctactgttgggtggatct
aacttcctgcccatatccagagtgctttttatggaaagaggggcagatggaaagctacag
tgggaagaggaggcacatgttgaccgtgacaatagtagtgagtgcttgttgtgtgtgcaa
gttccagcctatggtgacctgtctgtgaaccgcctagtatctgtgtgcctatacgtctcc
aacgggaagaggaaaaggagcagcactcactgtttcaagtacctgcccgaggaggaccct
ctgctgtcgcgtccctctgtcgtgcccctggaggaggtgacactctgctccatggggggg
cccagcagggtggacaggggtctgcacctgaggaatgatcccacacccgaggagagaggg
ctggctttgcacctgcccccctacccttcagcctactctcccccctacccaggccatggc
taccaggaggagtactgccacaagcctgaagctgttggtgacagcagaggttctctatcg
gaaagacgccccagctttgagaagttggagctgggcttcaccgagctactgcctcccctg
taccccagagtctcccagcctccctctccctccccatggctggaatccccatacctgtcc
tcctccccatctccctcccactcctcctctctgagtcccttccccacaggcagccccatc
tcctcctcccctcttccccccatgactacctcaccctacccccactacccctaccctcag
gagatctgcccctcgcctccctccaaccccagcccttatcaggacttctacccatcaccg
tactcccactatgaggtatgggatcaccagggcaggggacctggggaaagggaagctcag
gctgcgtctaaaatgcaggagaaccccctggaatttgccagctcatcatccgttcaccac
attacattagaggaagtgaatgaatttataggagaagacatcagatcgttccagttgggc
tcacagatggacagccaaccaggatga
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