Coregonus clupeaformis (lake whitefish): 121535666
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Entry
121535666 CDS
T08357
Name
(RefSeq) rho GTPase-activating protein 45 isoform X1
KO
K26415
Rho GTPase-activating protein 45
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121535666
Membrane trafficking [BR:
cclu04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121535666
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
GMIP-like_FCH
RHG29_45_N
C1_1
FCH
DUF6546
ESM4
Motif
Other DBs
NCBI-GeneID:
121535666
NCBI-ProteinID:
XP_041698854
LinkDB
All DBs
Position
21:42130978..42142631
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AA seq
1082 aa
AA seq
DB search
MFSRKKKELNKTSVLKKSLGGNFGSHNSSLSVLQEQLTRDGGLDVPLPLPASLQDPPCPT
TACLLRTRLATAASPSPVLGACLRRPTALSRHASAAGLPLQAAGAWAFSKTQGKGASWAS
SPTTEASDVGIEVEDIPSLLRDVACFAEAVEKLKEMVLWEDRQIDNLSDRQLDRHDLAQE
CLGEVLRVLRQVIGAYPLLNTVETLTAAGTLISKVKGFSYMDSSAMGKQDFEKAMETMAV
AFSSSVSELLMGEVDSSTLLSLPLTERSRSMENLYGLDSAQAKDCQGRSDQQHCCMLSGE
QVDLLLQCSEGGVDSALSYAKAVSRYMKDVISYVEKRSALEMEFAKGLQRLCQSSKQSIA
QPQMPFFSIYSLALEQDLEQSVGVQQTTGSIHTVLQPLMQCKQEHERRRRELGEQWQRAQ
RKLTDAESSMRKARGSYVIRCEEYDKARGRVEEELQGGGGGLKALDRKKRLEEEARIKAE
EAEAVYRACISEAEAQHQEREQTKGSTLRQIHDVIRHTDHTLRSCTVSYYQLLHMQTAAL
PVHYQTLCESTKLYEPGQQYAAHARHLHSSPEDARHLYTSTEDARHLYTSTEDARHLYTS
TEDARHLYTSTEDARHLSNPEPAAHYRFKPYSSNQLSGRTRHNSSNTDAPISMETTPTTD
APISTETIPTTDEEGGAGDGVTQRHGQGHQSHKSWPSTMRDSDSLGGVYGLESSSTGHVT
KANEELEEHDGNVTSFEQEPEMAVPTVTFRNVGMSKAAKTHRFRKLRTPAKCRECNSYVY
FQGAECEECYLACHRRCLESLAIQCGHKKLQGRLLLFGRDFTQGLGDPDGVPLVIRKCIT
EIESRALSMKGIYRVNGVKTRVEKLCQAFENGKELVELSQAFPHDISNMLKLYLRQLPEP
ILPFHLYPSLMGLAKESLRSASPSPDGGEVAGAAVLADLGAETPLEVLTLVHSLRELMLT
ELPQANTATLRYIAQHLRRVCECEQENKMSPSNLGIVFGPTLMRPRPSGATVSLSSLVDY
PHQARIVETLIVFYSTLFHDCSNGTQVSPSALSQDGGEEEERDCGGGAQGSIDKGDNRTD
AK
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgttctctagaaagaaaaaggaattaaataaaacgtcagttttaaagaagagtctaggg
ggaaactttgggtcccacaactcatcactatctgtcctccaggaacaactcactagagat
ggtggcttggacgtccccctccctctccctgcatccctccaggaccctccctgccccact
accgcctgtctgctgcgcaccaggctggccacggccgccagcccttcccctgtccttgga
gcctgccttagacggcccacagccctgagtcgacatgccagtgcggctggcctcccccta
caggcggctggagcctgggccttcagtaagacccaggggaagggagcgagctgggcctcc
agccccaccacagaggcctcagatgtgggcatcgaggtggaggacatcccctctctgctc
agggatgtggcttgtttcgctgaggctgtggagaaactgaaagaaatggtgctgtgggaa
gacaggcagatagataacctctcagacaggcagctggaccgtcatgacctggcccaagag
tgtttgggggaggtgttgcgtgtgttgaggcaggtgatcggtgcctaccccctcctcaac
actgtagagaccctcactgctgccggaacgctcatctccaaggtcaaagggtttagttac
atggacagcagtgccatgggtaagcaggactttgagaaggccatggagactatggctgtg
gctttcagtagcagtgtgtcggaacttttgatgggagaagtggacagcagtaccctcctg
tctctaccgctaacagagaggagcaggtctatggagaacctgtatggcttagactcggcc
caggcaaaagactgtcaagggaggagtgaccaacagcactgttgcatgctgagcggagaa
caggtggacctcctactgcagtgcagtgagggaggagtggactcagctctctcctatgcc
aaggctgtgtccagatacatgaaggacgtcatcagctacgtggagaaaagaagtgctctg
gagatggagtttgccaagggtctgcagaggctgtgtcagtccagtaagcagagcattgca
cagccccagatgccgttcttctccatctactctctggctctggagcaggacttggagcag
agtgtgggggtgcagcaaaccactggctccatacacactgttctacagcctctgatgcag
tgtaaacaggagcatgagaggagacgcagagagctcggagaacagtggcagagggcccag
aggaaactgactgatgctgagagtagcatgcgtaaggctcgaggctcgtacgtgattcgc
tgtgaggagtatgacaaggccaggggtcgggtggaggaggagctacaagggggagggggc
gggcttaaagctctggatcggaagaagcgattggaggaggaggccaggatcaaggctgaa
gaggcagaggctgtgtatcgtgcatgtatatccgaggcggaggcgcagcaccaggagaga
gagcagactaagggcagcactctcagacagatccatgatgtcatcagacacacagaccac
accctcagatcttgcacggtgtcatactatcagctgctgcacatgcagacggcagcgctg
ccggtccattatcagactctgtgtgagagcaccaagctctacgagccgggacaacagtac
gccgctcacgcaagacatctacacagcagcccagaggatgccagacatctctacacgagc
acagaggacgccagacatctctacacgagcacagaggatgccagacatctctacacgagc
acagaggatgccagacatctctacacgagcacagaggatgccagacatctgtcgaaccca
gagccagcagctcactaccgctttaagccctactcctcaaaccaactgtctggacgaacc
cgccacaacagctctaacacagatgcaccaatcagcatggagaccacacctaccacggac
gcaccaatcagcacggagaccatacctaccacagacgaggagggtggtgctggggatgga
gtcacacagagacatgggcaaggtcaccaatcacacaagtcctggccgtcaacgatgagg
gactcggacagtctgggaggagtctatggtctggagtcctccagcactgggcatgtaact
aaagccaatgaagagctggaggaacatgatggaaacgtcacctcgtttgaacaggagcct
gagatggccgttcccactgttaccttccggaatgtgggaatgtccaaggcagcaaagacc
caccgcttccgcaagctccgcacacctgccaaatgcagagagtgtaacagctacgtgtac
ttccagggtgcagagtgtgaggagtgttatctggcgtgccataggcgttgcttggagagc
ctggctatccagtgtggccataagaagctacaaggtcgcctgttgctgtttggcagggac
ttcacgcaggggctgggagaccccgatggtgtgcctctggtcatcaggaagtgcatcaca
gagatagagagcagggctcttagcatgaagggtatctaccgtgtgaacggggtgaagact
cgtgtggagaagctgtgccaggcctttgagaatgggaaagagctggtggaactgtcccaa
gcctttcctcatgatatcagcaacatgctcaaactttacctcagacagctgccagagcct
atcttgcccttccatctctatccatctctgatggggctggccaaggagagcctgcgttct
gcgtctcctagcccagatggaggtgaggtggctggggcagcggtgctggcagacctgggt
gctgagactcccctggaggtcctgactctggtccacagcctgagggagctgatgctaacg
gagctgccgcaggctaacacagccacactgcgctatattgcacagcacctgcgcagggtg
tgtgagtgtgagcaggagaacaagatgagtcccagtaacctgggcattgtgtttggtccc
actctgatgcgtccccgtccctctggggccactgtgtccctgtcctccctggtagactac
ccccaccaggcccgcatcgtagagactctcatagtcttctacagcaccctcttccatgac
tgctccaacggcacccaagtttccccctcagccctaagccaggacggtggagaggaggag
gagagagactgtgggggaggagcccaggggagtatcgacaagggagacaacaggacagac
gccaaataa
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