Coregonus clupeaformis (lake whitefish): 121535693
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Entry
121535693 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: far upstream element-binding protein 1-like
KO
K13210
far upstream element-binding protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121535693
03041 Spliceosome [BR:
cclu03041
]
121535693
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121535693
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121535693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
121535693
NCBI-ProteinID:
XP_041698892
LinkDB
All DBs
Position
21:43607699..43647186
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AA seq
688 aa
AA seq
DB search
MADYSNVAPPSGNGAGMNDAFKDALQRARQIAAKIGGDGVPSAPSGNEFGYGGQKRPLED
ADDCWTSLNSRTHREGMSSPFSDQPETKKVAPNDPFSAAMGMGGGGPRSSSEEFKVPDGM
VGFIIGRGGEQISRMQQESGCKIQIAPDSGGMPDRSVTLTGSPDSIQAAKRLLTEIVDKG
RPTPAFHHNDAGGPGMSVQEMLVPASKAGLVIGKGGETIKQLQERAGVKMVMIQEGPQNT
GADKPLRISGEPFKVQQAKEMVMELIREQGFREQRGEYGSRMGGGGGGGGGEGLDVPVPR
FAVGIVIGRNGEMIKKIQSDTGVRIQFKPDDGSTPERIAQIVGPPDQSQHAAEIISDLLR
SVQQGGPGGPNGGGRGRGRGGNGGGNWNMGPPGGLQEFTFTVPTMKTGLIIGKGGETIKG
ISQQSGARIELQRNPPPNSDPNIKMFTVRGSHQQIDYARQLVEEKIGGPVSPMGGPQGPP
GPHGGPSPHGPPXPPGPPAQMGPYNPGPYNQGPPGPHGPPAPYQPQGWGNGFPHWQQGQP
DPGKAAADANAAAWAAYYSQYQQQPQAPMTPTGGAPGSTQANGQGDPKGPGHTGQADYSK
AWEEYYKKMGQPGQQPQDYTKAWEEYYKKQGQAAPQAGAAPGGQPGGQPGGQPDYSAAWA
EYYRQQAAYYGQGSPQAMGAQPQAPQGQ
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggctgactactcgaacgtggctccgccgtcgggaaatggcgccggaatgaacgacgcg
tttaaagacgcacttcagcgagctagacagatcgccgccaagattgggggtgacggtgta
ccctcggcgccctcaggtaatgagtttggctatggaggccagaagcggcccctagaagat
gccgatgactgttggaccagtctaaacagtagaacccatcgggaaggaatgagctctcct
ttctcagaccaaccagagaccaagaaggtggcaccaaatgacccgttctcagcagcgatg
ggtatgggagggggtggtcctcgatcgtcttcagaggagttcaaggtccctgacggaatg
gttggattcattataggaagaggaggagaacagatatcccgtatgcagcaggagtcgggg
tgcaaaatccagatcgcccctgacagtggaggaatgcctgataggtcggtgacactgacg
ggatccccagactcaatacaagctgccaagaggctgctaacggagatcgttgataagggt
cgtcctactccagcattccaccacaacgacgccggcggtcctggtatgtctgttcaggag
atgctggtccctgcctccaaggctggcctggtcatcgggaagggaggagagaccatcaaa
cagctgcaggagagagccggggtcaagatggtgatgatccaggaagggcctcagaacacg
ggcgcagacaaacctctacgcatctctggggaaccttttaaagtccagcaagccaaagaa
atggtgatggagctgatcagagaacaaggcttcagggagcagaggggagagtacggctcc
aggatgggaggaggaggaggaggaggaggaggagagggcctggatgttcctgtccccagg
tttgcggtgggaatcgtgatcgggagaaatggagagatgatcaagaagatccagagcgac
acaggagtcaggatccagttcaaaccagatgacggcagtaccccggagaggatagcccag
atcgtgggtccccctgaccagtcccagcatgcagcagagatcatctctgaccttctgagg
agtgtccagcagggggggccgggggggcctaacggagggggcagggggagaggcaggggg
ggtaacgggggcggtaactggaacatgggtcctccaggtggactgcaggagttcaccttc
accgtccctaccatgaagactggactcatcatcggcaaaggaggagagaccatcaagggc
atcagccagcagtctggggctcgtattgagctacagaggaaccctccgcccaactcagac
cccaacatcaagatgttcaccgtccgaggatcgcaccaacagatagactacgcacgacag
ctggtcgaggagaagatcgggggtccagtcagtccaatgggtggtccccaaggtccgcca
ggcccccacggcggtccctctccccacgggcccccgngccctcctggacctcctgctcag
atggggccctacaaccccggtccctacaaccagggacccccaggaccacatggtcctcct
gctccctaccagcctcagggttggggcaacggcttcccccactggcagcagggacagcct
gatcctggtaaagctgcagctgacgccaacgcagcggcctgggcagcgtattactcccag
taccaacagcaaccccaggcccccatgacacccaccggcggcgccccagggagcacacag
gccaacgggcaaggtgaccccaagggacctggtcacactggacaggcagattactccaag
gcctgggaggaatattacaagaaaatgggacagccaggccagcagccacaggactacacc
aaggcttgggaggagtactataaaaaacaaggtcaagcggccccgcaggcgggagcagcg
ccaggtggtcagccaggtggtcagccgggtggtcagccagactacagtgctgcctgggcg
gagtactaccgccaacaggctgcgtattacggacagggaagcccacaggccatgggggca
cagccacaagcacctcagggccagtaa
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