Coregonus clupeaformis (lake whitefish): 121535704
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Entry
121535704 CDS
T08357
Symbol
gpc4
Name
(RefSeq) glypican-4
KO
K08110
glypican 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121535704 (gpc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cclu00535
]
121535704 (gpc4)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
121535704 (gpc4)
Proteoglycans [BR:
cclu00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
121535704 (gpc4)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
Others
121535704 (gpc4)
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Gene cluster
GFIT
Motif
Pfam:
Glypican
Fz
Motif
Other DBs
NCBI-GeneID:
121535704
NCBI-ProteinID:
XP_041698903
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Position
2:10438254..10495074
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AA seq
559 aa
AA seq
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MKTMLVFSTVYTFAVLFVSTKAEPKSTSCNEVRAAYSSKGFNANDVPNKGIHGTHLKVCP
QEYSCCTLEMEEKLSQQSHSDLKAPVSQLSTNLQSTFKQRHSHFDQFFRELLDNAERSLN
DMFVRTYGKMYVQNAELFKHFFQELKRYYVSGSGAVNLDSMLSDFWEDLLERMFRLVNVQ
YEFSDAYMECVSRHTEQLKPFGDVPRKLRLQLTRAFVAARTFTRGLALMPEVVNKVSTVS
ASPSCVRAAMKMMYCPYCSGQVALKPCQNYCLNVMRGCLANQADLDTEWNNFLDAMLSLA
ERLEGPFNFESVMDPIDVKISEAIMNMQENSMQVSQKVFQGCGQPQPGKGFRSRRSVKET
GFTGRFRPYSPDARPTTAAGTSLDRLTTDVKKKLKHAKKFWSTLPETVCVGERITSGDDC
WNGTAKSRYESVVMGNGLANQVSNPDVEVDITKPDLVIRSQIAVLKEMTSWLKAAHSGND
ISIDQDEDGSGGEESGSGCASPSCEADRDIYFSTPPTPINPRVVKVVHQETTGGVRVAHG
SMALALCGLVLALLAPHWR
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaatgttagtcttctctacggtttacacatttgccgtgctgtttgtttcgacg
aaggctgagcccaagtcgacaagctgcaatgaagttagggctgcgtacagttccaaaggc
ttcaacgccaatgatgttcccaacaaaggaatacacggaacccatctgaaggtgtgtccc
caggaatactcatgctgtaccttggagatggaggagaaactgagccagcagagccactca
gacctgaaggcccccgtctcccagctcagcaccaacctacagagcaccttcaaacagagg
cacagccactttgaccagttcttccgcgagttactggacaacgcggagcgctcgctcaac
gacatgttcgtgcgcacatacggcaagatgtacgtgcagaacgccgaactattcaagcac
ttcttccaggagctgaagcgctactacgtatcgggcagcggggcggtcaacctggactcc
atgctgtctgacttctgggaagacctcctggagaggatgttccgattggtcaacgtccag
tacgagttcagcgacgcctacatggagtgcgtcagccgccacaccgagcagctaaaaccg
tttggcgacgtgccacgcaagctccgcctccagctgacacgggccttcgtggcggcgcgc
acctttacccgcggcctggcgctcatgcccgaggtggtcaacaaagtctccacggtcagt
gcgtcccctagctgtgtacgggcagccatgaagatgatgtactgtccctactgttctggc
caggttgccctcaagccttgtcagaactactgtctcaacgtgatgcgtggctgtctggcc
aaccaggccgacctcgacaccgagtggaacaacttcctggatgccatgttgagtctggct
gagaggctggaggggcccttcaactttgagtctgtcatggaccctattgacgtcaagatc
tctgaggccatcatgaacatgcaggagaacagcatgcaggtgtcacagaaggtgtttcag
gggtgtggtcagcctcagccaggtaaaggcttccggtcccgtcgctcagtcaaggagaca
ggattcaccggtcgcttccgtccctacagccccgatgcacggcccaccacagctgctggc
accagcctggacagattgacgacagatgtgaagaagaagctgaagcatgctaagaagttc
tggtccacgctgccagagactgtgtgtgttggggagaggatcacgtctggggatgactgt
tggaacggaacagcaaagagcaggtacgagtctgttgttatgggcaacggattggccaat
caggtgtccaacccggatgtggaagtggacatcacaaagccagacctggtgattcgcagt
cagatcgcagtgttaaaggaaatgactagctggctgaaggccgcccacagcggcaacgac
atctccatcgaccaagatgaggacggtagcggaggagaggagagcggcagcggatgtgcc
tctccgtcctgtgaggcggaccgggacatctacttctccaccccgcccacccccatcaac
ccccgcgtggttaaggtggtgcaccaggaaacgactgggggagtccgtgtggcacacggg
agcatggctctggcactctgtgggctcgtcctggccctgctcgccccccactggagataa
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