Coregonus clupeaformis (lake whitefish): 121535773
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Entry
121535773 CDS
T08357
Symbol
tcirg1a
Name
(RefSeq) V-type proton ATPase 116 kDa subunit a3
KO
K02154
V-type H+-transporting ATPase subunit a
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00190
Oxidative phosphorylation
cclu01100
Metabolic pathways
cclu04142
Lysosome
cclu04145
Phagosome
Module
cclu_M00160
V-type ATPase, eukaryotes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
121535773 (tcirg1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121535773 (tcirg1a)
04142 Lysosome
121535773 (tcirg1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121535773 (tcirg1a)
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121535773 (tcirg1a)
BRITE hierarchy
Motif
Pfam:
V_ATPase_I
Takusan
Motif
Other DBs
NCBI-GeneID:
121535773
NCBI-ProteinID:
XP_041698974
LinkDB
All DBs
Position
21:58096465..58121617
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AA seq
824 aa
AA seq
DB search
MGAFFRSEEVCLVQLFLQSGSAYNCVSELGELGLVEFRDLNPNVNSFQRKFVNEVRRCEE
MEKTFTYLEQEISRSLFPPLTDPLPIPSPVPSAPQPRELMAIEEESERLARELREVSRNR
DSLMDQLIQLSQYRGVLIQTHSLTVSQAPPPSTLETAALLDNRQDIRLSFVAGVVHPWKV
PSFERLLWRACRGYIIVDFREMEERLELPETGEMVQWTVFLISFWGEQIGQKVKKICDCF
HTHTFDYPEGTTEREKFLHRLQGRIVDIKTVLSQTEHYLQQLLCRSVAVLPQWKVRVQKC
KAVQAVLNLCSPSVTDKCLIAEAWCPVRKLLLLQSALIEGTRKNGGGVDSFYNRLPDPSA
PPPTLFHTNSFTAGFQSIVDAYGVASYREVNPAVYTIITFPFLFAVMFGDVGHGLLMTMA
ALWMVLQERDLKLKTNDNEIWQMMFGGRYLILLMGLFSIYTGAVYNECFSKGLSPFPSGW
HLQPMFQHYNWSDETLRENRYLTLDPNVTGVFQGPYPFGIDPIWRLANNHLTFLNSYKMK
MSVIIGVVHMTFGVCLSFFNYIHLNKLSSVFLVLIPELLFMQCLFGYLVFMVVFKWLAFG
PQDSDRAPSILIHFIDMFLFTQNEDNPPLYHGQMIVQRVLVVVALASVPVLLLGKPLYLY
YNHRRRANTRAGEERPLVTDTSSINALQGDLEEGGTREEEFDTVDVFMHQAIHTIEYCLG
CISNTASYLRLWALSLAHAQLSEVLWVMVMRISLSWHGYVGSVVLAVIFSFFATLTVSIL
LVMEGLSAFLHALRLHWVEFQNKFYSGTGYKLKPFSFCSIRNPL
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgttctttcggagcgaggaggtgtgtcttgtgcagctctttctccaatcaggg
tcggcctacaactgcgtcagcgagcttggagagctgggactggtcgaattcagagacttg
aaccccaatgttaactcgttccagaggaagtttgtgaacgaggtgcggcgctgtgaggag
atggagaagaccttcacgtacctggagcaggagatcagtcggtccctgttccccccgctg
acggatcctctccccatccccagccccgtgccctccgccccccagcccagagaactcatg
gccatcgaggaggagagcgagaggctggccagggagctacgagaggtgtccagaaacaga
gacagcctgatggaccagctgatccagctcagccaatacagaggggttctgatccagaca
cactccctcaccgtctcacaggctccgcctccctctactctggagactgctgccttattg
gacaacagacaagacatcaggctgagttttgtggctggcgtggtccacccgtggaaggtt
ccgtcgtttgagcggctgctatggcgagcgtgccgcggttacatcatcgttgacttcagg
gaaatggaggagaggctggagcttcctgaaacgggcgagatggtccagtggacagtcttc
ctcatctctttctggggcgagcagattggtcagaaagtcaagaagatctgtgattgcttc
cacacccacacctttgactacccagagggcacgacggagagagagaagtttctgcacagg
ctacagggaaggatagtagacatcaaaacggtcctctcccagacggaacattacctgcag
cagctgttgtgtcgctcggtggccgtgctgccccagtggaaggtgcgggtccagaagtgt
aaggctgtccaggccgtgctcaacctctgcagcccctccgtcactgacaagtgtctgatc
gctgaggcctggtgtcccgttaggaaactgctactgctgcagagcgccctgatagaggga
acgaggaagaacggtggtggtgtggactcgttctataaccgcctcccggaccccagcgcc
cctcctcccaccctcttccacaccaactccttcacagccggcttccagagcatcgtagac
gcatacggtgttgccagctacagagaggtcaacccggccgtgtacaccatcatcaccttc
cccttcctgtttgcggtgatgtttggggacgttggccacggccttctcatgaccatggca
gccctctggatggttctgcaggagcgagacctcaaactcaagaccaacgacaatgagatc
tggcagatgatgtttggtggccggtatctgatcctgctgatgggtctattctctatctac
accggagccgtctacaacgagtgtttcagtaaaggcctcagccccttcccctcgggatgg
cacctacaacctatgttccagcactacaactggagtgatgagactctgagggagaaccgg
tatcttactctggacccaaacgtgaccggagtgttccagggaccctatccatttggcatc
gacccgatctggcggctggccaacaaccacctgacgttcctgaactcgtacaagatgaag
atgtccgttatcatcggggtggtccacatgactttcggagtctgcctgtccttcttcaac
tatattcacttgaacaagcttagcagtgtattcctggtactgatcccagagctgttgttc
atgcagtgtctgtttggctacctggtcttcatggtggtgtttaagtggctggcgtttggc
ccccaggactcagaccgggcccccagcatcctcatacacttcatagatatgttcctgttc
actcagaatgaggataatccgcccctctaccacggacagatgatagtccagagggtcctg
gtggtggtagctctggcctcagtgcctgtcctgttactagggaaaccactctatctctac
tacaaccacagaagaagggccaacaccagagcgggagaagagcgtccccttgtgacggac
accagctccatcaacgcactacaaggagacctggaggaaggaggaaccagagaggaggag
tttgatacagtggatgtgttcatgcaccaggccatccacactatagagtactgtctgggc
tgcatctccaacactgcttcctatctacgactctgggccctcagcctcgcacatgcacag
ctgtcggaggtgctatgggtgatggtgatgcgtatcagcctgtcgtggcatggctacgtg
ggatctgtagttctagccgtcatattttccttcttcgccacgctcaccgtctccatcctg
ctcgtcatggaggggctgtccgccttcctgcacgcgctcagattgcactgggtggagttc
cagaataagttctacagtggaacgggatacaagctcaaacctttctccttctgttctata
cggaacccactatag
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