Coregonus clupeaformis (lake whitefish): 121535777
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Entry
121535777 CDS
T08357
Symbol
zgc:165520
Name
(RefSeq) syntaxin-3 isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121535777 (zgc:165520)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121535777 (zgc:165520)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121535777 (zgc:165520)
Membrane trafficking [BR:
cclu04131
]
SNARE
Syntaxin (Qa)
Stx-PM
121535777 (zgc:165520)
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
121535777 (zgc:165520)
Exosomal proteins of other body fluids (saliva and urine)
121535777 (zgc:165520)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
Relaxase_C
AAA_13
Hydro_N_hd
STX6_10_61_N
YtxH
DUF6827
FUSC
CorA
FlaC_arch
DUF1664
Motif
Other DBs
NCBI-GeneID:
121535777
NCBI-ProteinID:
XP_041698983
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All DBs
Position
21:complement(58144308..58150576)
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AA seq
302 aa
AA seq
DB search
MKDRLEQLKAKSDVPGDDVEIPVENQAFMDDFFAQIEEIRSSIDKIDESVAQAKKLYSTI
LSAPTSDQKIQDDLEAVTNDIKKAAGTARNKLKSIEKQLETNTEERSSADMRIRKSQHAI
LAKKFVEVMTKYNEAQTDFRDKSKGRIARQLEITGKVTTDEELEEMLEGGNAAVFSAGIM
ESGISKQALNEIEARHKDIVRLESSIKELHDMFVDIAMLVENQGSMIDKIENNMDQSVGF
VERAVADTKKAAKFQQEARRVKLKRSVPDYPQSNLGGWIHSDHSVCQEIHKALLRGDTLQ
SG
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgattggaacagttgaaggcgaaaagtgatgtgcctggggacgatgtggag
attccagtggagaaccaagcctttatggatgacttcttcgcccagattgaggagattcgc
agcagcattgataagatagatgagagtgtggcgcaagcaaagaagctgtactctaccatc
ctctccgcccctacatcagatcagaagattcaagatgatttggaggcagtcaccaacgac
atcaagaaagcagccggcaccgctcgcaacaaactcaagagtatcgagaagcaacttgag
acaaacacagaggaacggtcgtcagcagacatgaggatacggaagtcccagcatgccatc
ctggccaagaagtttgtggaggtgatgaccaagtacaacgaggctcagacggacttcaga
gacaagagcaaaggccgcatcgcccggcagctggagatcacgggaaaagtaacgaccgac
gaggagctggaggagatgttggaaggaggaaacgcagccgtcttctccgcagggatcatg
gagtcgggcatatcgaagcaggcattgaatgagatcgaggcacggcacaaagacattgtg
aggctggagagcagcatcaaagagcttcatgacatgtttgtggacattgctatgctggtg
gagaaccagggcagtatgattgacaagattgagaacaacatggaccaatcggtgggcttc
gtagagcgggcggttgccgacaccaagaaagcagccaaatttcagcaggaggcccgtagg
gtgaagttgaagaggagtgtcccagattacccccagtctaacctgggtgggtggatccac
agtgatcactctgtctgtcaagagatacataaggcgctactcagaggagatacacttcag
tccggctaa
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