Coregonus clupeaformis (lake whitefish): 121535787
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Entry
121535787 CDS
T08357
Name
(RefSeq) FACT complex subunit SSRP1 isoform X4
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121535787
03036 Chromosome and associated proteins [BR:
cclu03036
]
121535787
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
121535787
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
121535787
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
HMG_box
POB3_N
SSrecog
SSRP1_C
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121535787
NCBI-ProteinID:
XP_041699006
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MVDTLEFSDIYQEVKGSWNDGRLRFGRQSVVYKSTKTGRVDSIPAAELSQAQWRRVCLGQ
GIKLTTSTGHIYKYDGFRDTDFEKISEYFKAHYKVELSEKELCVKGWNWGTAKFSVYFPF
PGPLLSFEVSDSPVFEIPLASVSQCATGKNEVTLEFHQNDEAEVSLMEVRFYVPPGDAAT
TEEGPEPVEVFRDSVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPSFLHLHGKTF
DYKIPYTTVLRLFLLPHKDQRQMFFMISLDPPIKQGQTRYHFLILLFSKEEDLSLSLNMT
EEEVEKRYGGKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFLGHSGTQCITCSYKASSG
LLYPLESGFIYIHKPPVHLRFEEVSCVNFARGTTTTRSFDFEIETKQGTQFTFSSIEREE
YGKLFDFVTAKKLSIKNRGIKEKKGMKGKDDMLEDSDEDQHDAYLERMKAEGKIREEAND
SDDSAEESDESFNPGEEDDDIAEEYDSKASASDSSAQGGDSDREKKKRPAKKAKLVKERK
PRKKKQKDSGAPKRPMSAYFLWLNASRESIKAEHPGISITEISKRAGEMWRELGKEQKEE
WDGKAEEAKKDYEVAMREYRESGGGSSAPSKKERKKKGGKNDEKNKKGKSGGGTERASET
TTGNDSFKSREFISSEESSSESDRGKGKRKRKGSDEQEEEVALTPPSSDSGSD
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacacactggagttcagtgacatttaccaggaggtcaaagggtcatggaacgac
gggcgtctgcggttcggtagacagagtgtggtgtataagagcactaagacagggagggtg
gacagcatcccagctgcggagttgtctcaggcccagtggagacgtgtgtgtctgggacag
ggcatcaagctgaccaccagcaccggacacatctacaaatatgacggcttcagagacacg
gactttgagaagatctctgagtacttcaaagcccactacaaagtggagctgtcagagaag
gagttatgtgtgaagggttggaactggggcaccgccaaattctctgtctattttccgttc
ccaggccctctcctgtcattcgaggtgagcgacagcccagtgtttgagatccccctggcc
agcgtgtcccagtgcgccacggggaagaatgaggtgacgctggagttccaccagaacgac
gaggcagaggtgtcgctcatggaggtccgattctacgtcccacccggggacgccgccacc
acggaagaggggccagaacccgtggaggtgtttagagacagtgtgctgtccaaggcagat
gtgatccaggctacaggagatgctgtgtgtatcttcaaagagctgcagtgtctcacgccc
aggggcaggtatgatatccgtatctaccctagctttctccacctccatggtaagacgttt
gactataagatcccctacaccactgtgctacgtctctttctactaccacacaaggaccag
aggcagatgttcttcatgatcagtctagacccgcccattaaacaggggcagacacgttac
cacttcctcatcctgctcttctccaaggaggaggacctcagcctctccctcaacatgaca
gaggaagaggtggagaagcgttatggggggaagctcagtaagaacatgtcaggttctctc
tatgagatggtcagcagggtgatgaaggctctggtcaacaggaagattaccgtgccagga
aacttcctgggtcactcggggacacagtgtataacgtgttcctacaaagcgtcgtcaggc
ctgctctaccctctggagagtggtttcatctacatacacaagccccctgtacacctgcgc
ttcgaggaggtgtcgtgtgttaactttgccagaggcaccacaaccacgcgctccttcgac
tttgagatcgagaccaagcagggcacccagttcaccttcagcagcattgagagagaggag
tatgggaagctgtttgactttgtgaccgccaagaagctcagcatcaagaacagaggaatc
aaagagaaaaagggtatgaagggtaaagatgacatgttggaggactcagacgaggaccag
cacgacgcctacctggagaggatgaaagcggagggcaagatcagagaggaggccaatgac
agcgatgactcagcggaagagagcgatgagtcttttaaccctggagaggaggatgatgac
atagcagaagagtatgacagtaaggcgtcagccagtgacagcagtgcacaggggggagac
agtgacagagaaaagaagaagagaccagccaagaaggccaaactggtgaaggagaggaaa
ccacgcaagaaaaagcagaaggacagtggcgcccccaagaggccaatgagcgcctatttc
ctgtggctgaacgccagccgcgagagcatcaaagcagagcaccctgggatatccatcaca
gagatctccaagagggccggagagatgtggagggaactggggaaggagcagaaagaggag
tgggatgggaaagcggaggaggcgaagaaggactatgaggtagcgatgagggagtacaga
gagagtggaggaggatcctctgccccctccaaaaaggagaggaagaagaagggggggaag
aacgatgagaagaataagaaggggaagtctggtggagggacggagagagcgagcgagaca
acgacaggaaacgacagctttaagagcagggagtttatctccagcgaagagagctcctca
gagtcagacagaggcaagggcaaacgcaaacgcaagggttcagatgaacaagaggaggag
gtggctttgaccccacccagttccgactcaggatcagactga
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integrated database retrieval system
