Coregonus clupeaformis (lake whitefish): 121535803
Help
Entry
121535803 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: Wilms tumor protein 1-interacting protein homolog
KO
K16682
LIM domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121535803
03036 Chromosome and associated proteins [BR:
cclu03036
]
121535803
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121535803
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
121535803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
121535803
NCBI-ProteinID:
XP_041699029
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MDHYEEDLGLRASKLMEDLSLYEAYKDGMYSSRRDMVINPDLDFSSPTIHEQKSKTMNGN
SAPHQQIHTVENYMSGNKVXTAAPVRPVNGNRAVPVDYCTPQRDIVYPNEDSYCTKSEIA
LPCYSGASERHRRYSLEVQGHRYSTGSAYDGVVLNKPVPPPGNRCNSICVTTNHDGRYNA
TSPRSSFASSLSSQEQSKHASPRSSISSPRTSLVVPGQDKYTSPRSSLVHCEGSSVLSPR
SSYASTASDTSKHSSPRASLNSYDCCSKPSSNRTSGISMGYDQRHISPRSSTASQYSCTT
SPRSSYSDSRYMPVGNHDLEGAVLHGMPVASPRSSICSQDGCARPGTIANCVVSPRSSIS
SHSSRSSRSSRGSMSTYPDLQLPSPRSSMLGTGLQEDILTHDCGDTNGVHNRIHLQALSG
MPEAQPQHAPQQSTQAGMNTEVTAGSPSSSYGLHTKTPASGQRFKLPYQVTPCRESGPSQ
AERSLEALTLELEKELEMHMKKEYFGICIKCGKGVYGASQACQAMGNLYHTNCFTCCSCG
RRLRGKAFYNVNGRVYCEEDFLYSGFQQTAEKCFVCGHLIMEMILQALGKSYHPGCFRCV
VCTEGLDGVPFTVDVENNIYCVKDYHTVFAPKCASCNQPILPAQGSEETIRVVSMDKDYH
VECYHCEDCGLQLNDEEGHRCYPLEGHLLCHGCHIRRLKVPVPAHPPPSYPLHVTEL
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggatcactatgaggaagatttgggactccgggcgagtaaattaatggaggacctttcc
ttatatgaagcatacaaggatgggatgtacagttcaaggagggacatggttatcaacccc
gatttggatttttcgtctccaacgatacacgagcagaaaagtaagacaatgaatggcaac
tctgcgcctcaccaacagatacacaccgttgagaattacatgtctgggaataaagtgnac
actgcggctcccgtgcgccccgtgaatggcaacagagccgttcctgtggattattgcacc
cctcaaagagacatagtttatcctaatgaagatagctattgcaccaaatccgaaattgct
ttgccgtgttatagcggcgcgtccgagcggcacaggaggtactccttggaggtgcagggg
cataggtacagcactggtagcgcgtacgatggagtggttttgaacaagccagtaccgcca
cctggcaacagatgcaacagtatctgtgttaccaccaaccacgacggcagatacaatgca
accagcccgcggtccagtttcgcatcctccctctcctcccaggagcaaagcaaacatgca
agcccgaggtcgagcatcagtagcccgcgcacgagtctggtggtacccgggcaagacaag
tacacgagtcccaggtccagtctggtacactgtgaagggagcagtgtcctcagcccccgg
tctagctatgcaagtacagccagcgacacaagtaaacattccagcccaagggccagtctg
aacagctatgactgctgcagtaagcccagcagtaaccgcaccagcggcatcagtatgggc
tacgaccaaaggcacatcagccccaggtccagcacagcgagccagtattcttgtaccacc
agtccacgctctagctattctgattcgcgttacatgcctgtggggaaccatgatctggag
ggtgcggttttgcatggcatgccggtggctagtcctcggtcaagcatctgcagccaggac
gggtgcgcaagacccgggacaatagctaactgcgtcgttagtccccggtccagtatctcc
agtcacagttccagaagttcccggagctccaggggatctatgagcacctacccggatctc
caactgccttcacccaggtcctcaatgctggggactggtttgcaggaggacatactaact
cacgattgtggagataccaacggtgtccataatcgtatccatctccaagcgctctcgggg
atgccagaagcccagccacagcatgcaccacaacagtcaacccaggcagggatgaataca
gaggtgaccgctggatcaccatcatcttcttatgggctccatacgaaaactccagcctca
gggcagaggtttaaactaccttaccaggtgaccccatgccgggaaagtggcccaagccaa
gcagaaaggagtctggaagcactcaccttggagctggagaaggagttagaaatgcacatg
aaaaaagaatactttggtatctgtatcaagtgtgggaagggtgtgtatggggccagccaa
gcctgtcaggccatggggaatctgtaccataccaactgcttcacctgttgctcctgtgga
aggaggctgagagggaaagctttctacaatgtcaacggcagggtctactgtgaagaggac
ttcctgtactctggttttcagcagacggcagagaagtgctttgtgtgtggtcacctcatc
atggaaatgatcctgcaggcactgggcaagtcctaccaccctggctgcttccgctgtgtg
gtctgtacagagggtctggacggagtgcctttcactgtggacgtggagaacaacatctac
tgtgtcaaagactaccacacggtctttgccccaaaatgtgcctcatgcaaccagcccatc
ctccctgctcagggctctgaggagaccatccgggtggtgtccatggacaaggactaccat
gtggagtgctatcactgcgaggactgtggcctccagctaaacgacgaggagggtcaccgc
tgttaccccctggagggccacctgctctgtcacggctgccacatccgcaggctcaaggtc
ccggtgcccgcccacccgccccccagctacccactacacgtcactgagctatga
DBGET
integrated database retrieval system
