Coregonus clupeaformis (lake whitefish): 121535944
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Entry
121535944 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: trifunctional purine biosynthetic protein adenosine-3
KO
K11787
phosphoribosylamine--glycine ligase / phosphoribosylglycinamide formyltransferase / phosphoribosylformylglycinamidine cyclo-ligase [EC:
6.3.4.13
2.1.2.2
6.3.3.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00230
Purine metabolism
cclu00670
One carbon pool by folate
cclu01100
Metabolic pathways
Module
cclu_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
121535944
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
121535944
Enzymes [BR:
cclu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.2 phosphoribosylglycinamide formyltransferase 1
121535944
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.3 Cyclo-ligases
6.3.3.1 phosphoribosylformylglycinamidine cyclo-ligase
121535944
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
121535944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GARS_A
Formyl_trans_N
GARS_N
AIRS_C
GARS_C
AIRS
ATP-grasp
ATP-grasp_3
CPSase_L_D2
ATP-grasp_4
Dala_Dala_lig_C
ATP-grasp_2
RimK
Motif
Other DBs
NCBI-GeneID:
121535944
NCBI-ProteinID:
XP_041699096
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
MAERVLVIGSGGREHTLAWKLAQSPHIQQVLVAPGNAGTTNCGKISNSEVSVSNHSILAQ
FCKEHSVGLVVVGPEVPLAAGMVDDLQAAGVPCFGPSAKAAQLEASKSFSKAFMDRHGIP
TARWCSFTDPQEACSYIRTASFPALVVKASGLAAGKGVIVAKDQEEACQAVLDIMKDKAF
GSAGETVVVEELLEGEEVSCLCFSDGCTVSPMPPAQDHKRLQDGDLGPNTGGMGAYCPTP
QVSQELLQKIRETVLQKTVDGMKEEGAPYVGVLYAGLMLTKQGPKVLEFNCRFGDPECQV
LMPLLKSDLYEVLQSTLQGKLASSTTVWHQDSSAVTVVMASPGYPGSYKKGVAITGLSQV
EETGVQVFHAGTALKEGGVVSSGGRVLTVTAVRSSLEMALHAANRGVAAVGFPGAVYRRD
IGHRAIAHLTQHSRGLTYKDSGVDIAAGNRLVDMIKPLAKATSRSGCNAELGGFAGLFDL
KAAGFIDPILVSGTDGVGTKLKIAQACQQHSTLGQDLVAMCVNDVLAQGAEPLFFLDYFS
CGRLDVGVASAVIGGVAEACGLAGCALLGGETAEMPGVYGPGEYDLAGFCVGAVERGALL
PRLGDICEGDLLIGVAASGXHSNGFSLVRKVLERAGVTYSSPAPFGKPGQTVGEVLLTPT
KIYSRLLLPILRSGAIKAYAHITGGGLLENIPRVLPQELSVDLDASALDHPPVFSWLQKE
GGLCEEEMGRTFNCGLGAVLVVAFPDAQRVLRQLQAHEDAWIVGSLAHKQPGAKPVVIRN
LEQSLRVGPSPCVVDLGPLQNGASQGDSSSTVPRKRTRVGVLISGTGTNLQALMEQAKRT
SSSAEIVVVISNRPGVLGLKRASLAGIQTRVVDHKLYGSRAEFDGTIDRVLEEFDVEVVC
LAGFMRILTGSFVRKWNGKLLNIHPSLLPAFKGVNAQKQALQAGARVTGCTVHFVAEEVD
AGAIIAQEAVPVLMNDTEESLSNRIREAEHRAFPAALELVAGGGVRLGDDGRIVWNPNTQ
G
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcgagtgctggtgattggcagtggtgggcgggaacacaccctggcatggaag
ctggcacagtcgccacacatccagcaggtcctggtggcaccggggaacgctggcaccacc
aactgtggaaagatctccaactctgaggtgtcagtgagtaaccactctattctggctcag
ttctgtaaggagcatagcgtggggctggtggtggtagggcctgaggtgcctctggcagca
ggcatggtagatgacctgcaagcggcgggggtcccgtgtttcggcccctcagcgaaggct
gcccagctggaggccagtaagagtttctccaaggcctttatggaccgtcacggcatcccc
acagcccgctggtgctccttcaccgacccacaggaggcctgcagctacatccgcacggcc
agttttcctgctctggtggtgaaggccagtggcctggctgcagggaagggtgtcattgtt
gccaaggaccaggaggaggcctgccaggctgtgctggacataatgaaggacaaggcattc
ggctctgccggggagactgtggtggtggaggaacttctggagggagaggaagtgtcttgt
ctgtgtttcagtgatggctgcactgtgtcccccatgcccccggcccaggaccacaaacgc
ctgcaggacggggatctgggccccaacacgggcggcatgggggcctactgccccaccccg
caggtgtctcaggagctgttgcagaagatcagagagactgtcctccagaagactgtggat
ggcatgaaggaggagggtgccccctatgtgggtgtgctgtacgctgggctgatgttgacc
aagcaggggcccaaggtcctggagttcaactgtcgcttcggcgacccagagtgtcaggtg
ctgatgcccttgctgaagagtgacctgtacgaggtgctccagagcaccctgcaggggaag
ttagcatccagcaccactgtgtggcaccaggacagctctgcagtcactgtggtcatggcc
agccccggctaccccggctcctataagaaaggtgttgcaatcacaggtctgtctcaggtg
gaggagacaggggtgcaggtgttccacgccggaacggcgctgaaggaagggggcgtggtc
tccagcgggggccgtgtcctcactgtcaccgctgttaggtcgtccctggagatggccctg
cacgcagccaatcggggcgtggccgccgtagggttcccgggagccgtgtaccgacgtgac
atcggccaccgagccatcgcccacctcacccagcacagcagaggcctaacctataaggac
agcggagtggacatcgctgcgggcaaccggctggtggacatgatcaagccgttggccaag
gccacctctcgctcagggtgtaacgctgagctggggggctttgccggcctctttgacctc
aaagctgcaggcttcattgaccccatcctggtgtctgggacagacggagtagggaccaag
ctcaagattgcccaggcatgccagcagcacagcaccctgggacaggacctggtggccatg
tgtgtcaacgacgtgctggcccagggggcggagcctctcttcttcctggactacttctcc
tgtggccggctggatgtgggcgtggcctccgccgtgatcgggggcgtggccgaggcctgc
gggttggcgggctgcgctctactgggcggcgagactgcggagatgcccggtgtgtacggc
cccggagagtacgacttggcagggttctgcgtgggggcggtggagaggggcgccctgcta
cccaggctgggggacatttgcgagggggacctgctcatcggggttgccgcctcggggntg
cacagcaacggattcagcctggtccggaaggtccttgagagggcaggagtcacctacagc
tcccctgcacctttcgggaaacctggacaaaccgtgggcgaggttctcctgacgcccact
aagatctacagccgcctgctcctgccaatcctgcgcagcggcgccatcaaggcctacgcc
cacatcactgggggcggcctattggagaacatcccccgagtactgcctcaggaactgtcc
gttgacctggacgcatccgcgttggatcatccccctgtgttctcatggctccagaaggag
gggggcttgtgcgaagaggaaatggggcgcaccttcaactgtggccttggagccgtgctg
gtggtggcctttccggacgcccagagggtcctgaggcagctccaagcccatgaggatgcc
tggatcgttggctcgctggcccacaagcagcctggggccaagcctgtggtgatcaggaac
ctggagcagagcctgcgtgtaggcccctctccctgcgtagtagacctggggcccctgcag
aacggagcgtctcaaggggacagcagcagcaccgtcccccgcaagaggaccagggtaggc
gttctcatctcaggcacaggcaccaacctgcaggcgctgatggagcaggccaagagaacg
tccagctcagcagagatcgtggtggtgatctccaataggccgggggttctgggcctcaaa
agggcctctctggccggcattcagacacgggtagttgaccataaactgtacggtagccgg
gcagagtttgacggcaccattgaccgcgtgctggaggaattcgatgtggaggtggtgtgt
ctcgccggcttcatgaggatcctgacagggtccttcgtcaggaaatggaacggaaaactg
ctgaacatccatccgtccctgctgcccgcattcaagggggtgaatgcccagaagcaggct
ctacaggcgggggcacgggtcactggctgcaccgtccactttgtggctgaagaggttgat
gccggggccatcattgcgcaggaggcggtgcctgtgttgatgaatgacactgaggagagc
ctatcaaatcgcatccgggaggcagagcaccgggccttccctgccgccctggaactggtg
gccgggggcggtgtgaggttgggggatgacggacgcatcgtctggaaccccaacacgcag
ggctaa
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