Coregonus clupeaformis (lake whitefish): 121535963
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Entry
121535963 CDS
T08357
Name
(RefSeq) ras-related protein Rab-9A
KO
K07899
Ras-related protein Rab-9A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121535963
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
cclu04031
]
121535963
Membrane trafficking [BR:
cclu04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab GTPases
121535963
GTP-binding proteins [BR:
cclu04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
121535963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
RsgA_GTPase
Gtr1_RagA
GTP_EFTU
AAA_16
AAA_7
TIR_2
FeoB_N
Motif
Other DBs
NCBI-GeneID:
121535963
NCBI-ProteinID:
XP_041699137
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All DBs
Position
29:complement(61567599..61571004)
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AA seq
201 aa
AA seq
DB search
MTAKSSLLKVILLGDGGVGKSSLMNRYVTNKFDTHLFHTIGVEFLNKELEVDGRTVTLQI
WDTAGQERFRSLRTPFYRGSDCCLLTFSVDDNQSFHNLNNWKKEFAYYADVKEPEKFPFV
ILGNKLDVPERQVSGEDARQWCRENGGHPYFETSAKDSTNVAAAFEEAVRRVLAQEERGE
HLIPTDTVDLHRKPRSGASCC
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgacagccaagtcgtccctgctcaaagtgatcctcctgggggacggcggcgtgggcaag
tcctccctcatgaaccgctacgtcaccaacaagtttgacacgcacctcttccacacaatt
ggcgtggagttcctcaacaaggagctggaggtggacgggcgcaccgtgacgcttcaaatc
tgggacacggcgggccaggagcgcttccgctcgctccggacacctttctaccgcggctct
gactgttgtctgctaaccttcagcgtggatgacaaccagagcttccacaatctcaacaac
tggaagaaggagtttgcctactacgctgatgtcaaggaacccgagaagttcccgtttgtg
atcctgggtaataagttggatgtgccggagaggcaggtttcgggcgaggacgcccgccag
tggtgccgcgagaacggcggccacccgtactttgagacgagcgctaaggactcgaccaac
gtggcggcggcgttcgaggaggcggtgaggagggtgctggcgcaggaggaaaggggggag
cacctcatccccacagacacagtggacctgcacaggaagccgcgctctggcgcctcctgc
tgctga
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