Coregonus clupeaformis (lake whitefish): 121535970
Help
Entry
121535970 CDS
T08357
Name
(RefSeq) SLIT and NTRK-like protein 5
KO
K25836
SLIT and NTRK-like protein 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121535970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
LRRNT
LRR_LRWD1
Hepsin-SRCR
Motif
Other DBs
NCBI-GeneID:
121535970
NCBI-ProteinID:
XP_041699149
LinkDB
All DBs
Position
29:complement(62331190..62337285)
Genome browser
AA seq
867 aa
AA seq
DB search
MHIWILKIILLIAASLSMVEMYDNYGEICRNLCTCEEKEGTLTVSCENRGIVRLTEISPV
HFSMYHLLLTGNLLKKLSLNDFINYTGATILHLGNNDIAEVETGAFNGLQGLKRLHLNNN
KIDVLRDDTFVGLESLEYLQIDYNYITNIEPNALSKLHQLTVLILNDNLLSALPTNIFRN
VPLTHLDLRGNRLKMFPYIGLLEHMDKVVELQFEENPWNCSCELIALKAWLESISYTALV
GEVVCETPFRLHGRDLDEVSKQELCPRRAISEYEMRPPPPLSTNGYFQTTPASVTASATS
SNAFKASSRPTKGTRQSNRTRSKPTSRIPANPYNYGPIIAYQTKSPVPLDCPTTCTCNLQ
IADLGLNVNCQERKIENISDLKPKPYNPKKMYLTGNYIPVVRRSDFLEATGLDLLHLGNN
RISLIQDRAFGDLTNLRRLYLNGNLIDRLTAEMFFGLQSLQYLYLEYNKIREIVGGTFRF
VPNLQLLFLNNNLLKTLPGGIFTGLSLSRLNLRSNHFQNLPVSGVLDQLKLLLQIDLIEN
PWDCSCDVVGMKIWLEQLSAGTVVNEVKCETPKRHSGIDMRSIQSEQLCPDYSDLVVSTA
PPPDEPLPDRATTTETYQRSNHTSSVVPLSVLILSLLLVFIMSVFVAAGLFVVVVKKRKK
SQSDRTSTNNSDVSSFNLQYSLYSNNRTVPKVKAPAGHVYEYIPHPMGHMCKNPIYRSRE
GNTVEDYRDLHELKVTYRSDVDEERNSSMRSPTYSVSTIEPREDPSPAQNAEHFFRGIIE
ADNQSPSGNSLEYKYTGPVSYTYNPNFDVRRQFLHPERIRETVLYGTAPSTVYVEPNRNE
YLELKAKLQVEPDYLEVLEKQTTFSQF
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgcatatctggatactgaaaataatccttctgatcgcagcatctctgagtatggttgag
atgtacgacaattatggggagatctgtaggaatctatgtacatgcgaggagaaggaaggg
acactgacggtgagctgcgagaacagagggattgtcagactgacagaaataagcccggtg
catttttcaatgtaccaccttctgctgacagggaatctcttaaagaaactgtccctcaac
gacttcatcaactacactggggcgaccatattgcatttaggcaacaatgatattgctgaa
gtggaaacgggggctttcaatggactccagggattaaagagattgcacctgaacaacaac
aagatagacgtcctaagggatgatacgtttgtcggcctggagagtttggaataccttcag
attgattacaattacatcaccaatatagagcccaatgcccttagtaaattgcatcagctc
acagttctcattttaaatgacaatttgctctctgctctgcctaccaacattttccggaat
gttcccttaacacatctggacctcaggggcaaccggttgaaaatgtttccttacatcggg
ctcctggagcacatggacaaagtggtggaattacaatttgaggagaacccatggaattgc
tcatgtgagctcatcgccctgaaagcttggctggagagcatatcgtacacagctttagtg
ggggaggtggtctgtgagacgccattcaggctgcatggcagagacctggacgaggtctcc
aaacaggagctgtgcccccgccgagcaatctctgaatatgaaatgcgcccccctccccca
ctcagcaccaatggatatttccaaaccacgccagcttcggtgactgcctcagccacctcg
tcgaatgctttcaaggcgtcgtcaaggcccaccaagggcacccgtcaatcaaaccgaacc
aggtcaaagcccacctcccggattccggctaacccttacaactatggccccatcattgct
tatcagaccaaatctcctgtgcctttggactgtcccaccacctgtacgtgtaatctgcag
attgctgatcttggactaaacgtcaactgccaggagagaaagattgagaacatatctgac
ctgaagcccaagccatacaatcccaaaaaaatgtacctcacggggaattacattcctgtg
gtacgcagatctgatttcttggaggctaccggattggatttgcttcacctaggaaacaat
aggatatccctcatccaagacagagcttttggggatttaaccaacctgcgtaggctgtat
ttaaatggtaatctaatcgacaggcttacagcagagatgttttttggcctgcagagtttg
cagtatctctacttagaatacaacaaaatccgagagattgtagggggcacgttccggttt
gtgccaaaccttcagttgcttttcctcaacaataaccttctgaaaaccttaccagggggc
atctttactgggctgtccctctctagacttaatctccgcagtaaccatttccaaaacctg
cctgtgagcggtgtgttagatcagctgaaattgctcttgcagatagatctgattgagaac
ccgtgggattgctcgtgtgacgttgtcggcatgaagatatggctcgagcagctcagtgca
ggcaccgttgttaatgaggttaaatgcgagacccccaaacggcacagcgggattgatatg
cgttctattcagtctgaacagctgtgtccagattactctgacttagtcgtctcaacagcg
cccccccctgacgagcctctgccagacagagccaccaccacagagacctaccagagatct
aaccacactagcagcgttgtccctctctctgtcctcatcctcagcctgctgctcgtgttc
atcatgtccgtcttcgtggcagcggggctgtttgtggtcgtggtgaaaaagcgtaaaaag
tcccagagcgaccgcaccagcaccaacaactctgacgtgagctcgtttaacttgcagtac
agcctttacagtaataaccgaaccgtccccaaagtcaaagcccccgccggacatgtgtac
gagtacatccctcaccctatgggccacatgtgcaaaaatcccatttacaggtccagggaa
ggcaacacagtcgaggattaccgcgacctccatgaattgaaggtgacttataggagtgac
gtggatgaggaaaggaacagtagcatgagaagtcccacttatagcgtgagtactattgag
cctcgcgaggacccctcccctgcacagaatgctgagcacttcttcaggggcatcatagag
gcggacaaccaatccccctccggtaacagtctagaatacaagtacactgggcctgtctcg
tacacgtacaacccaaactttgatgttagacgccagttcttacacccagagaggatacga
gaaacagtgctctatggcaccgcaccgagtactgtttacgtggagcccaacagaaatgaa
tatttggaactaaaagcgaaacttcaagttgagccggactacctcgaagttcttgagaaa
cagaccactttcagtcagttttga
DBGET
integrated database retrieval system