Coregonus clupeaformis (lake whitefish): 121535979
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Entry
121535979 CDS
T08357
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC6
KO
K22372
E3 ISG15--protein ligase [EC:2.3.2.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121535979
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
121535979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
121535979
NCBI-ProteinID:
XP_045074685
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MLCWGDSSSGQFGLNFENVSVPIAGNILSDKVTEIACGEQHTLFLTVDGRILSCGRNSKG
QLGRQKNRDSKLPAPVEGLARVVSVACGQDHCVAVCASGQVYSWGAGGEGQLGIAPTTVS
KVPRPRPVPIPSPLPITVIQVACGNSHSLALTKGGQVFSWGLNSHGQLGLGKEVPLQPIP
ALVRSLTGVPVTQVAAGGTHTLALTLPGLVYCCGANGAGQLGLNRVDEKGRYNICAVPEL
RVLGVSFISCGEAHTAVLTKDGQVFTFGEGSRGQLGHDASANELIPKLVEGLDGLVSQIA
CGSHHTLVLGSSGQLWAFGSGVKGQLGTGNTEGSLRPTSVLLKRASGGAATVIHNDMKIS
VGWNSNFIYTAESSEREQPIGRLDEAKLKKWLTMEQGNAEAQREISLMFSTSSSLVASFT
KVNESPSTKAAGALTVDLEAASQAFDQLFNIPWIRKSAKINSLFKDLYKYQQSIKYQYLV
NILPLVDTLRVSAAVIKSPEIFMILPTIPLLHDDQNVMNMVIALAIVIVEDLSETAMKTL
KEWWSSMETNIMTKHILMWKNALSFMLRNGLLVTHNPGVKFLLETLKYLNRANKRVRRTQ
KVPASTFYVEEIIDRVLPMEDVKLWRFWSKREDTQSTPVIFCRYPFVLNLICKMAIFNNN
AHFTKEVHKLTHLLTVMCPSGTSRDNPNSTPAPVFQLNLRRLSLIEDTFRQLGAADHDYF
QRELVVQFVEDMKLSLVNIRDFFLHVFDELLAPESEMFMYNDTKTLVWFPAKPRVEEKSY
FLFGVLCGMALYNHNIVHLPFPLALFKKMVGVKPSLEDLREFDPVLGKSLRYLLEDYTDD
DVEENLDMTFTVIWDDLKVELDPKETGKPVTSSNKKQFVDAYVNLAFNQSAEKVFEEFRR
GFFKVCDRDVVEFFQPEELRGVMVGKEDYDWDTLKQNTVYDGEYHARHPNIVTFWEAFEE
LTDDQKKAFLLFLTGCDRAPILGMDNIQMKIAVLQNSTELHFPESLTCHFLLLLPIYPSK
EMLLARLKEAVAHNRGFWKE
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgctggggagacagttcgagtggacagtttggtctaaactttgagaatgtgtct
gttcctatagcagggaatatattatctgataaagtcacagaaattgcttgcggggagcaa
cacactttatttctcacggtagatggcaggatcctatcatgcgggcgcaactcaaaggga
caacttggcagacagaagaacagagattcaaaactaccagcgccagtggagggtctggcg
agagtggtctctgtggcttgtggtcaggaccactgtgtagctgtgtgtgcatcaggacag
gtgtactcctggggggcagggggggagggacagctgggcatcgcccctactactgtctcc
aaagtccccagaccaagaccagttccaataccttcgcccttgccaataacagtgatacag
gttgcttgtggaaattcccattctttggccctgactaaagggggacaggtgttctcatgg
ggtctgaacagccatggacagctgggcctggggaaggaggtgcctctgcagcccatacct
gccctggtgcgctccctcactggggtcccagtgacccaggtagcagccggaggaacccac
actctggccctcaccctcccaggcctggtctactgctgtggggcaaacggggctgggcag
ctgggactcaaccgtgtggatgagaaaggccggtacaacatctgtgcagtgcctgaactc
agagtcttgggggtttccttcatcagctgtggagaggcacatactgctgttctcaccaag
gatggacaggtgttcacctttggagagggaagccgaggccagcttgggcacgacgcatca
gctaacgaactcatacccaaactggtggagggcctggatggactggtctcacagatagca
tgtggcagccatcacaccctggtgctggggtcctcaggtcaactctgggcctttggcagt
ggggtcaaaggtcagctagggactggcaacacagagggcagcttgcgacccacctcagtg
ctgctgaaaagggcttctggtggggcagcgacagtcatacacaacgacatgaagatatca
gtgggatggaattcaaacttcatttacactgctgagagttctgaaagagaacagccaatc
gggaggttagatgaagccaagctgaaaaaatggctgacgatggagcaaggaaatgcagag
gcgcaaagagaaatatccttgatgttctcaacaagttcaagtcttgtggccagtttcacc
aaagtcaatgagtctccatcaactaaagctgcaggagctttgacagtggacctagaggct
gctagccaggcttttgatcagctcttcaacataccatggatcaggaaatcagctaagatt
aactcactcttcaaagacttatacaaatatcaacaatctattaaatatcaatatttagta
aatatattgccactggtggacactcttcgcgtttcagcagctgtcatcaaatcaccagag
atctttatgatactacccacaatccctcttctccacgatgaccagaacgtcatgaacatg
gttatagctttagcaatagttatcgttgaggatctgagtgagacagccatgaaaacttta
aaagagtggtggtcctcgatggagacaaacatcatgactaagcacattctgatgtggaag
aatgccttgtcattcatgctgaggaacggtcttctggttacccacaaccccggagtcaaa
ttcctgctggaaaccctcaagtacctcaacagagcaaacaaaagggtcagaagaacccag
aaagttccagccagtaccttttatgtggaagagatcattgatagggtccttcctatggag
gatgtgaagctttggcgtttttggtcaaaaagggaggacacgcagtcaacacctgtcatc
ttttgccgttacccatttgtgttgaatctgatctgcaagatggcaattttcaacaataac
gcacattttacaaaggaggttcacaaactcacccacctgctgacagtgatgtgtccttct
ggaacgtcccgagacaacccaaactcaacccctgctccagtcttccagctaaacctaagg
cgcctatcactcatcgaagacaccttcagacaactgggtgctgcagatcacgattacttc
cagagagaacttgtggtgcagtttgtggaggacatgaagctgtcgctcgtcaacataagg
gacttcttcctccatgtgtttgatgagctgttggcaccagagtctgagatgttcatgtac
aacgacaccaagacactggtctggttccctgccaagcccagagtggaggagaagagctac
ttcctgtttggtgtcttgtgtggcatggccctgtacaaccacaacattgtacacctgccc
ttccctttggccctgttcaagaagatggtgggggtcaagccctcactggaggacctgaga
gagtttgatcctgttttaggaaagagtttgcggtacctcttggaggactacactgacgat
gatgttgaagaaaacctggacatgaccttcaccgtgatctgggatgacttgaaggtggag
cttgatcccaaagaaacaggaaaaccagtcacaagttctaacaagaagcagtttgttgat
gcctacgtgaacctcgccttcaaccaatcagcggagaaggtgtttgaagagttcaggaga
ggcttcttcaaggtgtgtgacagagacgtggtggagttcttccagcctgaggagctcagg
ggagtcatggtggggaaagaggactacgactgggacacgctcaaacagaacactgtgtat
gatggagagtaccatgccagacatcccaacatcgtcacattctgggaggcttttgaggaa
ctgacagatgaccaaaagaaagctttcctcctgttcctgacgggctgtgatcgcgctccc
atcctgggcatggacaacatccagatgaagatagcagtcctgcagaactctactgaacta
catttcccagaatcccttacctgccacttcctcctgctgctgcccatctacccctccaag
gagatgctgctggccaggctcaaagaggcggtggcccacaacagaggcttctggaaggag
taa
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