Coregonus clupeaformis (lake whitefish): 121535981
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Entry
121535981 CDS
T08357
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121535981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121535981
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121535981
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
HECT type E3
121535981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
121535981
NCBI-ProteinID:
XP_041699163
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MMLCWGSTVEGQLGIGGARDPVCEPRSCQAFNGRGLKEVACGGRHSLFLLHDGRVYTCGS
NRCGQLGHDKPGDSPELVAALDTQKIGVVSCGQAHSMALNEQGQVFAWGAGGVGQLGLGT
AEETVPIPRLIKKLCEHRISQIMCGNQHCIALSKDGQLFTWGQNSSGQLGLGKGEPSTLS
PQPLKSLSGIPLAQITAGGDHSFALSLSGAVFGWGKNSAGQLGLNDKQDRSVPCHIKFLR
SQKVVYISCGDEHTAALTKDGGLFTFGDGSRGQLGHDSTNNEPLPRQVQELMGSEVSQIA
CGRHHTLAFVPSSGLVYAFGCNTNGQLGTGTRGDIKSPLPVKSSLTGSLTGSPRHMSGPD
HYAITKINCGGDHNFLLYSDEKSSTVPEDFRVTNISKSISLINYDSLNTWRMKLLDNTDS
TITNDIIILLSSTACWNASFLDESDDSHFKTNPKVPGIDLNSVRLLFETLSKPPFARLLE
QATKSFESLLIPQLPCSPPDVEAMRIYLILSECPALHDSKNYITLTIPLAMAILRLDANP
SKVLDNWWCLVDGSVFSRLVDMYKSIVVFLLTGGKALLVPVFLESYTSATLKLLEKLHKV
NLKAGHVEYNRFYIPDITTLVDIQEDYLKWFLSKAELKMRTPAVQNSVTLCAYPFILNAQ
AKTTMLQTDAELQMQMAVSGANLHNVFMLLTLEPLLARNPFLVLHVRRDHLVSDALRELT
IYSDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFTQYTQSNLLWFSDK
CFVEHNWFNLIGIICGLAIYNSTVVDLHFPLVLYKKLLCVAPTLEDLKELSPTEGRSLQQ
LLDHEGEDVEETFCLNFAITREYYGLTEVKELIPGGDRITVDNNNREEFVEAYLKYMFGD
SVSELYQAFSSGFLKVCGGKILSLFQPSELMAMVVGNNNYNWEEMEKNAVYKGEYSATHP
TVRMFWEVFHEFPLEKKKRFLLFLTGSDRIPIHGMESLRISIQSTSAEEHYLPVAHTCYN
LLDMPRYQTKETLHRRLTQAVEQYEGFSLV
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgttggggcagtactgtggagggccagctgggtatcggcggggcgagggac
cccgtgtgcgaaccccggagctgccaggcgttcaatgggcgcggcctgaaggaggtggcg
tgcggcgggcgccattcgctattcctgttgcatgatgggagagtgtacacgtgcggctcc
aaccgctgtggacagctgggccacgacaagccgggggactcaccagaactggtggcggcc
ctggacacccagaagataggggtggtgtcatgcggccaggcccactccatggcgctgaat
gagcagggccaggtgtttgcctggggggccggtggagtgggccagctgggtctcgggaca
gctgaggagaccgtcccaatccccaggttgatcaagaagctgtgcgagcatcgcatctct
caaatcatgtgtggcaaccagcactgcatcgcactctctaaagacggtcagctgttcacg
tggggccagaactcgagcggtcagctgggtttggggaagggcgagccgagcaccttgtct
ccccagcccctcaagtctctgtcagggatccccctggctcagatcaccgctgggggagac
catagcttcgccttgtccctctctggagccgtgttcggctggggcaagaacagcgccgga
cagctggggctaaatgacaaacaggaccggtctgtcccttgccacatcaagttcctcaga
tcccaaaaagtggtttacatcagctgtggagacgagcatacagctgccctcaccaaggat
gggggtttgtttacgtttggggacggctcgcgtggtcaactgggtcacgactccaccaac
aacgagcctctacccagacaggtgcaggagctgatgggcagcgaggtgtcccagattgcc
tgtggcagacaccacaccctggcgtttgtgccttcctccggtctcgtgtacgctttcggt
tgtaacacaaacggtcagctgggcaccgggacacgaggtgacatcaaaagcccacttcct
gtcaaaagcagcctcacaggaagtctcaccggaagtcctcgtcatatgtcagggccagat
cattatgccattaccaaaatcaactgtggaggggaccataacttcctattgtactcagat
gaaaagagttccaccgttcctgaagacttcagagtcactaacatcagtaaaagcatctct
ttgataaattatgacagtttgaatacgtggaggatgaaactcctagacaacacagattcc
actatcaccaatgacatcattatcctgctgtcttccaccgcctgttggaacgccagcttc
ctggatgagagtgatgacagccattttaagaccaaccctaaagtccctggtatcgatctc
aactcggtccgcctgctgtttgagacactcagtaaaccgcccttcgccagactcctggag
caggccactaagagttttgagagcctgctgatcccccagctgccctgctccccccctgac
gttgaggccatgaggatctacctgatcctgtcggagtgtcccgccctgcacgactccaag
aactacatcaccctcaccatacccctagccatggccatactccgcctggatgccaacccc
agcaaagtgctcgataactggtggtgcctggtggacggcagtgtgttctccaggctggtg
gacatgtataagagcatcgtggtgttcctgttaaccggaggaaaggccctgctcgtccct
gtcttcctagaaagctacaccagtgccacgctaaagcttctagagaaacttcataaggtt
aacctgaaggccgggcatgtggagtacaaccgcttctatatccctgacatcaccaccctg
gtggacattcaggaagactacctcaagtggtttctgagtaaagcagagcttaaaatgaga
acaccagcagtacagaactcagtgactttatgtgcctacccgtttatactgaacgcccaa
gccaagaccaccatgctgcaaactgacgctgagctacagatgcagatggcggtgagcggg
gccaacctgcataacgttttcatgctgctgacgttggaacccctcctggcgcggaacccc
ttcctggtgctccacgtacgcagggaccatttagtgagtgacgcgctgagggagctcacc
atctactccgacgtcgacctcaagaagcccctcaaggtgatctttgatggggaggaggcg
gtcgatgcagggggggtaaccaaggagttcttcctactgctgctgaaggagctgatggac
cctgtatatggcatgttcacccagtacacccagtccaacctgctctggttctctgataaa
tgttttgtggagcacaactggttcaacctgatagggatcatctgtgggctggccatctat
aacagcacggtggtggacctccacttccccctggtcctctacaagaagctactgtgcgta
gcacccactctggaggacctcaaggagctgtcacccacagagggcaggagtttacaacag
ctcctggaccatgagggagaggacgttgaggagacattttgtctcaactttgctatcacc
agagagtactatggtctgacggaggttaaggagcttatccctggaggagaccgcatcact
gtggacaacaacaacagggaggagtttgtggaggcctacctgaagtacatgttcggggac
tcggtgagcgagctgtaccaggccttctcctctgggttcctgaaggtgtgcggtgggaag
atcctgtcgctgttccagccctccgagctcatggccatggtggtgggaaacaacaactat
aactgggaggaaatggagaagaatgcagtttacaaaggagagtattcagctactcatccg
actgtgaggatgttttgggaggtattccatgagttccctctggaaaagaagaagcggttc
ttattattcctgacgggcagcgaccgcatccccatccatggcatggagagcctccgcatc
tccatccagtccacgtcggccgaggagcactatctgcccgtggcccacacctgctacaac
ctgctggacatgccccgctaccagaccaaagagaccctgcaccgccgtctcacccaggcc
gtggagcagtacgagggcttcagcctggtgtga
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integrated database retrieval system
