Coregonus clupeaformis (lake whitefish): 121535988
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Entry
121535988 CDS
T08357
Symbol
tbc1d9
Name
(RefSeq) TBC1 domain family member 9 isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121535988 (tbc1d9)
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121535988 (tbc1d9)
Endosome - Golgi transport
Rab GTPases and associated proteins
121535988 (tbc1d9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
121535988
NCBI-ProteinID:
XP_041699175
LinkDB
All DBs
Position
22:complement(63843..101493)
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AA seq
1296 aa
AA seq
DB search
MWVHPEEVLQAGALWITERANPYFILQKRKGHGDSGGGLAGLLVGTLDVVLDSSARVAPY
RILYQTPDSLIYWIIAHGCSRKEITEHWEWLEQNLLQTLSIFENESDITTFVKGKVQGII
AEYNKNQDVKEDDDTDKFKEAICKFRKLFGMPEEEKLVNYYSCSYWKGKVPRQGWLYLSI
NHICFYSYLLGKEAKLVIRWADITQLEKSATLLLPDAVKVSTRVAEHVFSVFLNVNETFK
LMEQLANIAMRQLLDNKGFEQDRSLPKLKRKTPKKVSALKRDLDARAKSERYRALFRLPK
DEKLDGHTGCTLWTPFNKMHILGQMFVSTNYICFTSKEETLCSLIIPLREVTIVEKADSS
NFLPSPLSISTKNKMTFLFANLKDRDFLVQRISDFLQQTTSKIYFEREITGSVNSSDDEV
YSQQGSLLSSSPQRSSLGSEGFSEGERQFNLNDNSVPTATQALMTMYRRRSPEEFNPKLA
KEFLKEQAWKNHFTEYGQGVCMYRTEKTKDLVLKGIPENMRGELWLLFSGAINEMATHPG
YYEDLVEKSMGKYNLATEEIERDLHRSLPEHPAFQNEMGIAALRRVLTAYAFRNPNIGYC
QAMNIVTSVLLLYAKEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELAREYVPEL
YDCMQDLGVISTISLSWFLTLFLSVMPFESAVVVVDCFFYEGIKVIFQLALSVLHANIHQ
LLEAKDDGEAMTVLGRYLDSVTNKDSTLPPIPHLHSLLTDDGEPHPEVDIFKLVRSSYEK
FGSIRADVIEQMRFKQRLRVIQTIEDTTKRNVVRTIVTETAFSIDELEELYVLFKAEHLT
SCYWGSTGGSNPTERHDPSLPYLEQYRIDLEQFRGLFSLLFPWAPANGANGAHADPLALR
FFRLLDHNGDSLINFREFISGLSVLCHGDLTEKLKLLYKMHVMPEVAHEQEEPDSAFEAT
QYFFEDITPETSNGLDPKCKSEKDDGFVRVTFKTEKVKKLHTPDYHHYLRLWNQGTKNKL
DNMKDLPKLNQSQFIELCKTLYNMFSEDAQEQELYHATATVTSLLLEMGEVGKLFCHSKD
QEEDQDDPEEAKTSGPARDGGAKSGGVFQQRGQGEGEQEESQARPCGPGKRDGGGEQLSA
MEDIKLEDSSPKDTGTSSSMLISDDETKDDTSMSSYSVLSGGSHELDDKLHCEDINDDTV
LVLSENGPHGGGGGNGPHGGGGPHGRDGGLPHSTSIDKDWAITFEQFLASVLTEQALVLY
FEKPVEVAARVTNAKNVRKVGCPLLSTSDYEISLSG
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtccaccctgaagaggtgttgcaggcgggagcgttgtggataaccgagcgagca
aatccctatttcatcctccagaaacgcaagggccacggggacagcggaggaggactagcg
ggtctgttggtgggaaccctagacgtggtgctggactccagtgctcgagtggccccttac
agaatcctttaccagacacccgactccctaatctactggatcattgcgcatgggtgctcc
cgtaaggagatcacagagcactgggagtggctggagcagaacctcctgcagacgctgtcc
atcttcgagaacgagagtgacatcactacctttgtcaagggcaaagttcagggtattata
gcagagtacaacaagaaccaggacgtgaaggaggacgacgacactgacaagttcaaggag
gccatctgtaagtttcgtaagctgtttggcatgcctgaagaggagaagctggtcaactac
tactcctgtagctactggaagggcaaggtgccccggcagggctggctctacctcagcatc
aaccacatctgcttctactcttacctgctggggaaagaagccaagctggtgatccgctgg
gccgacatcacccagctggaaaaaagtgccacgcttctcctccccgacgccgtcaaggtg
agcacgcgggtggctgagcacgtcttctcggtcttcctcaacgtcaacgagaccttcaag
ctgatggagcagctggccaacatcgccatgagacagctcctcgacaacaagggctttgag
caggaccgctccctgcccaaactcaagaggaagacacccaaaaaggtgtccgctctcaag
agggacctggatgccagggctaagagcgagcgctaccgggcgttgttccgtctgcccaag
gatgagaagctggacggacacacgggctgcaccctttggacccccttcaacaagatgcac
attctgggccagatgtttgtctccactaactacatctgcttcacttccaaggaggagacc
ctgtgcagcctcatcatccctctaagagaggtgacgatagtggagaaggcggacagctcc
aactttttgcccagcccactgtccatcagcaccaagaacaagatgaccttcctgttcgcc
aacctcaaggaccgggacttcctggtccagaggatctctgacttcctgcagcagaccacc
tccaagatctacttcgagagggagattaccgggagtgtgaacagctccgacgacgaggtg
tactcccagcagggctctctcctctccagcagtccccagcgcagcagcctgggctcagag
ggcttctctgagggcgagcgccagtttaacctcaacgacaacagcgtgcccaccgccacc
caggccctcatgaccatgtaccgccgccgctcgccagaggagttcaaccccaaactggcc
aaggagttcctgaaggaacaggcgtggaagaaccacttcaccgagtatggccagggggtg
tgtatgtaccgtacagagaagaccaaggacctggtgcttaaaggcatcccagagaacatg
aggggagagctgtggctgctcttctctggggcgatcaatgagatggcgacccaccctggc
tactatgaggacctggtagagaaatctatggggaagtacaacctggccacggaggagatc
gagagagacctgcaccgctccctccccgaacacccagccttccagaacgagatggggatc
gctgccctacgaagggtcctcactgcgtacgccttcagaaacccaaacataggctactgc
caggccatgaacatagtgacgtcggtgctgctgctgtatgctaaggaggaggaggccttc
tggttgctggtggctctgtgtgagaggatgctgcctgactactacaacaccagggtcgta
ggggctctggtagaccagggtgtatttgaggagctggccagggagtacgtccctgaactc
tacgactgcatgcaggacctgggagtcatctccaccatctccctctcctggttcctcacc
ctgttcctcagtgtcatgcccttcgagagcgccgttgtggtggtcgactgcttcttctac
gagggcatcaaggtcatcttccagttggcgctcagcgtgctacacgccaacatccaccag
ctgctggaggccaaggacgacggagaggctatgaccgtgctgggaaggtacctggacagc
gtgaccaataaggacagcaccctgccccccatcccccacctccactccctgctgacagac
gatggggagccccacccagaggtggacatcttcaagctggtccgcagctcctacgagaag
tttggctccatccgggcggacgtgatcgagcagatgcgcttcaaacagaggctaagggtc
attcagaccatcgaggacaccaccaaacgcaacgtggtcagaaccattgtcacagagact
gccttcagcatcgacgaactggaggagctttacgttctgttcaaggcggaacacctgacc
agctgctattggggcagcacgggtggcagcaaccccacggagcgccacgaccccagcctg
ccctacctggagcagtaccgcatcgacctggagcagttcagggggctgttctccctgctc
ttcccctgggcccctgccaacggggccaacggggcccatgcagaccccctggccctgcgc
ttcttcaggctcctggaccataacggagactctctgattaacttccgggagtttattagt
ggactgagtgttctatgccatggggacctgactgagaaactaaagctcctctacaagatg
catgtgatgcctgaggtggcccatgagcaggaggagccagactctgccttcgaggccacc
cagtacttctttgaggacatcactccagaaacttccaatggccttgaccccaagtgcaag
agcgagaaggatgacgggttcgtcagggtcacgttcaagactgagaaagtgaagaaactg
cacacccctgactaccaccactacctgaggctgtggaatcagggcaccaagaataaactg
gacaacatgaaggatctgcccaaactcaaccagagccagttcatagagctgtgcaagaca
ctctacaacatgttcagcgaggacgcccaggagcaggagctgtaccacgccacggccaca
gtcaccagcctgctgctggagatgggcgaggtgggcaagctcttctgccactccaaggac
caggaggaggaccaggacgacccagaggaggccaaaaccagtgggccagccagagatgga
ggggccaagtctgggggtgtcttccagcagaggggccagggagagggggagcaggaggag
agccaggccaggccgtgtggccccggaaagagggacggcgggggcgagcagctgtccgcc
atggaggacattaagctggaggactcgtccccgaaagacacagggacatcgtcctccatg
ctcatctcagacgacgagaccaaagacgacacgtccatgtcgtcctactcggtgctcagc
ggcggctcccatgagctcgacgacaagctacactgcgaggacattaatgacgacactgtc
ctggtgcttagcgagaatgggccccacggtggaggtggagggaacgggcctcacggcgga
ggtgggccccacggcagagatggggggctgcctcacagcaccagcatagataaagactgg
gccatcacctttgagcagttcctggcctcggtgctcactgagcaggccctggtgctttac
ttcgagaagccagtggaggtggccgcacgtgtcaccaatgccaagaatgtgaggaaagtg
gggtgccccctactgtccactagcgactatgagatctccctgtctgggtag
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