Coregonus clupeaformis (lake whitefish): 121536004
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Entry
121536004 CDS
T08357
Symbol
abce1
Name
(RefSeq) ATP-binding cassette sub-family E member 1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclu03009
]
121536004 (abce1)
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
121536004 (abce1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
Fer4_6
AAA_22
AAA
RsgA_GTPase
AAA_15
AAA_16
AAA_29
Fer4_2
nSTAND3
NACHT
Fer4_10
AAA_23
SRP54
TsaE
Fer4_4
ORC-CDC6-like
AAA_30
Fer4_21
Fer4_16
AAA_24
Fer4_7
Fer4_9
Fer4_3
AAA_5
AAA_19
Beta-TrCP_D
Motif
Other DBs
NCBI-GeneID:
121536004
NCBI-ProteinID:
XP_041699209
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All DBs
Position
22:complement(1115964..1126383)
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AA seq
599 aa
AA seq
DB search
MSEKNTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTAQSKIVWISESLCIGCGI
CIKKCPFGALSIVNLPSNLEKETTHRYCANSFKLHRLPIPRPGEVLGLVGTNGIGKSTAL
KILAGKQKPNLGKYDAPPDWQEILTYFRGSELQNYFTKILEDDLKAIVKPQYVDQIPKTV
KGTVGSILSRKDDSKTETIVCEQLDLTHLRERNVEDLSGGELQRFAIAVVCIQRADIFMF
DEPSSYLDVKQRLRAAVTIRSLISPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVT
MPFGVREGINIFLDGYVPTENLRFREISLVFKVAETANEEEIKRMCHYQYPHMKKNMGDF
ALEILEGEFTDSEIMVMLGENGTGKTTFIRMLAGRLKPDEGGEVPILNVSYKPQKISPKF
KGSVRALLHEKIRDAYTHPQFVTDVMKPMQIESIIDQDVQNLSGGELQRVAMALCLGKPA
DVYLIDEPSAYLDSEQRLVCAKVIKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGIPS
RSTAANTPQTLLAGMNKFLSQLEITFRRDPNNFRPRINKMNSIKDCEQKKSGNYFFLDD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagaaaaacaccagaatcgccattgtgaaccatgacaaatgcaagccaaagaaa
tgccggcaggagtgcaagaagagttgccctgtggttcggatgggcaaactgtgcatagaa
gtcacagctcagagcaaaattgtgtggatttctgaatcactctgtatcggatgtggcatc
tgtatcaagaaatgtccatttggggccttgtctattgtcaacttgccaagcaacctcgag
aaagagacaactcacagatactgtgccaactccttcaagttgcatagattacccattccc
agacctggagaggttttgggacttgtgggcaccaatggaatcgggaaatccacagcgctg
aaaattttggctggaaaacagaagcctaacttgggaaagtatgatgctccaccagactgg
caggagatcctgacctacttccgtggctctgagctccagaactactttaccaagatcctg
gaggatgacctgaaggccatcgtcaagccccagtatgtcgaccagatccccaagactgtc
aaggggactgtgggctccattctgagcaggaaagacgactccaagacggagaccatcgtc
tgtgagcagcttgatctgactcatctcagggagaggaatgtggaggacctatcaggagga
gagctgcagcgctttgccatcgctgtggtctgcatccagagagcagacatcttcatgttt
gacgagccgtccagttacctggatgtgaagcagcgtctaagagctgccgtcaccatccgc
tccctcatctccccagacagatacatcatagtggtggaacacgacctgagtgtgctggac
tacctgtctgacttcatctgctgtctgtatggagtgcccagtgcctatggagtggtcact
atgccctttggagtcagggaaggcatcaacatcttcctggatggctatgttcccacggag
aatctgcgcttcagggagatatcgctggtgttcaaggtggcagagacggccaacgaggaa
gagatcaagaggatgtgccactaccagtacccccacatgaagaagaacatgggagacttt
gccctggagatcctggagggagagttcaccgactctgagatcatggtcatgctgggagag
aatgggacgggcaaaaccacgttcatcagaatgctggctggccgtctgaaaccagatgaa
gggggggaagtgcctatcctgaacgtcagctacaaaccccaaaagatcagccccaaattc
aaaggtagtgtgcgggccctgctccatgagaagatccgagacgcctatactcaccctcag
tttgtgactgacgtcatgaagcctatgcagattgagagcatcatcgaccaggacgtccag
aacctgtctggaggagagttgcagagggtggccatggctctgtgtctggggaaaccagct
gatgtctacctgatagacgagccctccgcctacctggactctgagcagcgtctcgtgtgc
gccaaggtcatcaaaagattcatcctccatgccaagaagacagcgttcgtggtggagcat
gacttcatcatggccacctacctggctgaccgcgtcatcgtgttcgacggtattccctca
cgaagcaccgctgccaacacgccacagaccttactcgcagggatgaacaagttcctatca
caactggagatcacgttcaggagagaccccaacaacttccgaccaaggatcaacaagatg
aattccataaaggattgtgaacagaagaagagtgggaactacttcttcctggacgactaa
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