Coregonus clupeaformis (lake whitefish): 121536065
Help
Entry
121536065 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: importin-5-like
KO
K20222
importin-5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121536065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclu03009
]
121536065
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
121536065
Pre-60S particles
121536065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Importin_rep_6
Importin_rep_4
HEAT_EZ
HEAT
HEAT_2
Vac14_Fab1_bd
TOR1L1_N
Cnd1
Importin_rep_5
Adaptin_N
PDS5
HEAT_EF3_N
TPR_TNPO3_IPO13_3rd
Cnd3
CEP104-like_TOG
MMS19_C
IBN_N
TPR_Trm732_C
ARM_ARMC5
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
121536065
NCBI-ProteinID:
XP_041699302
LinkDB
All DBs
Position
22:766479..781637
Genome browser
AA seq
1093 aa
AA seq
DB search
MAEQQQFYSLLGNLMSPDNDIRKQSEEAYDTIPGQTKITFLLQAIRDADCAEEVKTMAAV
LLRRLLSSSFEEIYPGLTVDMQTAIKTELVTSIQTEASPNIRKKVADIAAELCRNLLDDD
GNNQWPELLKFLFDSVNSDNVGLREAALHIFWNFPGIFGNQQQHYMEVIKRMLVQCMQDQ
ENPQIRTLAARAAASFVLSNEGNTALLKHFSDLLPGILQAVNESCYQGDDSVLKSLVEIA
DTAPKYLRPNLEATLQLSLKLCADTNLTNMQRQLALEVIVTLSETAAAMLRKHTAIVASS
VPQMLAMMVDLEEDEEWSMADELEDDDFDSNAVAGESALDRMACGLGGKIVLPMIKQHIM
TMLQNPDWKYRHAGLMALSAIGEGCHQQMEAILNEIVSFVLLFCQDPHPRVRYAACNAIG
QMATDFAPHLKKKFHDKVISALLQTMEDQTNPRVQAHAAAALINFTEDCPKSLLIPYLDS
LVQHLHVIMVAKLQELIQKGTKLVLEQVVTSIASVADTAEEKFVPYYDLFMPSLKHIVEN
AVQKELRLLRGKTIECISLIGLAVGKDKFMPDASAVMQLLLKTQTDFNDLEDDDPQISYM
ISAWARMCKILGKEFQQYLPVVMGPLMKTASIKPEVALLDTQDMENMSEDDGWEFVNLGD
QQSFGIKTAGLEEKATACQMLVCYAKELKEGFVEYTEQVVKLMVPLLKFYFHDGVRVAAA
ESMPLLLECARVRGPDYLTQMWHFMCDALIKAIGTEPDSDVLSEIMHSFAKCIELMGEGC
LNNEHFEELGGILKGKLEEHFKNQELRQAKRQDEDYDEGMEETLQDEDENDVYILTKVSD
ILHSVFSSYKEQVLPWFEQLLQLIVQLVCPSRPWADRQWGLCIFDDVVEHCSPSSFKYAD
YFLRPMAQSLCDTSPEVRQAAAYGVGVMAQYGGENYRPFCTEALPLLVGVIQSPDSKIKE
NVNATENCISAVGKVMRFRPECANVNEILPHWLSWLPLNEDKEEAVHTFDFLCDLIESNN
PIVLGPDNANLPKIFQIIAEGVTNESVKSEDACSKRLANVIRQVQGSGGLWTQCVAMLNE
TQQKAIQDLLNTA
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcagcagcagttctacagcttgctgggcaacctgatgagccctgacaacgac
atcaggaaacagtccgaggaagcttatgacaccatccccggtcagacaaagatcacattt
ttgctgcaggccatcagagatgcagactgtgcagaagaggtcaagacgatggcggcggtg
ctgctgcgtcggctgctgtcgtcctccttcgaggagatctaccccggcctgacggtggac
atgcagacggccatcaagacagagctggtcacaagcatccagacagaggcctcgcccaac
atccgcaagaaggtcgccgacatcgctgcagagctctgccgcaacctcctagatgatgac
ggaaacaaccagtggccagaactgctcaagttcctgtttgactcggtcaactctgacaac
gttggcctgagagaggctgccctgcatatattctggaacttcccaggtatctttggcaac
cagcagcagcactacatggaggtgatcaagaggatgctggtacagtgtatgcaggaccag
gagaacccgcagatccgtaccctggctgcccgtgctgcagcctccttcgtcctgtccaac
gagggcaacaccgccctgctgaagcacttctctgacctgctgccaggcatcctgcaggcg
gtgaatgagtcgtgctaccagggagatgactctgtgctgaagtctctggtggagatagct
gacacggcccccaagtacctgcggcccaacctggaggccacccttcagctcagcctgaag
ctgtgtgctgacaccaacctgaccaacatgcagaggcagctggccctggaggtcatcgtc
acgctgtccgagaccgccgccgccatgctgaggaaacacaccgccatcgtggcatccagc
gttccccagatgctggctatgatggtggatctggaggaggatgaggagtggtctatggct
gacgagctggaggacgatgactttgacagcaatgcagttgcaggagagagtgctctggac
agaatggcctgtgggctgggaggaaagatcgtgttacccatgatcaaacagcacatcatg
actatgctgcagaaccctgactggaagtaccgccacgccggcctcatggctctgtctgcc
atcggggagggctgccaccagcagatggaggccatcctcaacgagatcgtcagcttcgtg
ctgctgttctgtcaggaccctcaccccagagtccgctatgctgcgtgtaacgccatcggg
cagatggccaccgatttcgccccccaccttaaaaagaaattccacgataaggtgatctct
gccctactgcagaccatggaggaccagaccaacccacgtgtccaggcccacgctgccgcg
gccctcatcaacttcactgaggactgccccaagtccctccttatcccctacctggacagc
ctggtccagcacctacatgtcatcatggtggccaaactacaggagctgatccaaaagggc
accaagctggttctagagcaggtggtgacgtccatagcgtctgtggcggacacggccgag
gagaagtttgttccctactacgacctgttcatgccctccctcaaacacatcgtggagaac
gccgtgcagaaggaactgaggctgctcagggggaagaccatcgagtgtatcagcctcatc
ggcctggccgtcggcaaggacaagttcatgcctgatgcgtcagctgtgatgcagctgctg
ctgaagacccagacagacttcaatgacctggaggatgacgacccacagatctcctacatg
atctcggcatgggctaggatgtgtaagatcctggggaaggagttccagcagtacctgcct
gtggtcatggggcccctcatgaagactgcctccatcaagccagaggtggccctcctggac
acccaggacatggagaacatgtcagaggatgacggatgggagtttgtgaacctgggagac
cagcagagcttcggcatcaagacagccggtctggaagagaaggccaccgcctgccagatg
ctggtgtgctatgccaaagagttgaaggaagggttcgtggagtacacagaacaggtggtc
aagctgatggttcctctgctcaagttctacttccatgatggtgtgcgggtggcagcagca
gagtccatgcccctgctgttggagtgtgcgcgggtgcgaggcccagactacctcacacag
atgtggcacttcatgtgcgacgccctcatcaaggccattggcacagagccggactcggac
gtcctatcagaaatcatgcattcgtttgccaagtgcattgagttaatgggagagggctgc
ctgaacaacgagcactttgaagagctgggagggatcctgaaagggaagcttgaggaacac
tttaagaaccaggagctgagacaggccaaacgacaggatgaggactacgacgaggggatg
gaggaaactttacaagacgaggatgaaaacgatgtgtacatactgaccaaagtgtcagat
attttgcactctgtgttcagcagttacaaggaacaagtgctgccctggtttgagcagctt
ctacagctcatcgtacagcttgtgtgtcctagcaggccatgggcagacaggcagtggggt
ctgtgcatctttgacgacgtggtcgagcactgcagcccctcttcctttaaatacgcagac
tacttcctgcggcccatggcccagtccctgtgtgacaccagccctgaggtgagacaagct
gcagcctacggagtgggagtcatggctcagtacggaggagagaactaccgacccttctgc
acagaggccctgcccctactggtgggagtgatccagtctccagactccaagatcaaggag
aatgtcaacgccacagagaactgcatctcagccgtgggcaaggtcatgaggttcaggccc
gagtgtgccaacgtcaacgagatccttccccattggctctcctggctgccactcaacgaa
gacaaggaggaagctgtgcacaccttcgacttcctgtgtgaccttattgaaagcaacaat
cctattgtcctcggaccagacaatgcaaatcttcccaagatattccagatcatcgctgaa
ggggtcacaaacgagtctgttaagagtgaggatgcatgcagcaagagattggcaaatgtc
atccgtcaagtgcagggttctggaggactgtggacacagtgtgtagcgatgctgaatgag
acacaacagaaggccatccaggacctcctcaacaccgcttga
DBGET
integrated database retrieval system
