Coregonus clupeaformis (lake whitefish): 121536132
Help
Entry
121536132 CDS
T08357
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121536132
Membrane trafficking [BR:
cclu04131
]
Protein recycling
Others
Others
121536132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
121536132
NCBI-ProteinID:
XP_041699665
LinkDB
All DBs
Position
1:complement(56808363..56922360)
Genome browser
AA seq
1097 aa
AA seq
DB search
MNCFGRENRLKQHEFGESFRSRGRRRKRSFQTAESRATWSGFRWNGEDASTSDQHDEFKV
ICSTFALTGDSAHNQAMVHWSGQNSSVILMLTKYFDFSLGSVTESSLWRSTDYGTSYEKL
NEKVGPKTILSYLYVSPNNKRKIMLLTDLEVESSLLISLDEGASYQRYHLAFDIISLLFH
PEQEDWILAYSHDQKLYVSVEFGRRWQLVHESVVPNRFYWSKLGLDKEPGMIHLETSVSD
RRSQYITCKLQNCSEANKGRPFPGFISPDSLVVQDQYVFIQVPMGGRPVHYVSYKRNTFF
PMKLPKYILPKDLQIISIDDNQVVAAVQDWHQNDSYNLYMSEARGLFFTLALENIVSSVG
PEGNVMIDLYEVAGIKGLFLSNKVVEDQVKTFITYNKGRDWNLLQAPTTDLKGTRLYCVQ
PYCSLHLHLHVSDNPYTSGNIVSKESAPGIIVASGTIGPELTTYNVSIFITSDAGNTWRE
VFEEEYSILFLNQGGALVAIRHTPLPIRHIWLSFDEGKRWNKYSFTPSPLYVDGVLGEPG
EDTLIMTIFGHFSHRSEWQLVKIDFRSIFNRRCNTDDYQTWQLHNDGKVCIMGVKRIFQN
LKPDTRCVKTRDQYISQMSDSCPCTEADFECDYGFERQSDGGCTPVFWFVPSSVSRDCTT
GDSFLNTTGYRKALSNNCTAGTLGKYSPRSQRCPRQAPRGLQLVTSEGTLTATMGDNVTF
LVFLEEGDGSITSITVDFGDGMAISYANISSIEDGVKHIYSKVGIYQVAATALNSLGSER
VLLYLHVTCLLEQVQLSAPSVVVRNEAVNLTTVLKPSYVGTVTYYWWFNNHTEPVMTLVG
GMSFTFSKEGTHTVTVQVSVGNTFLQDKITVAVYEYFRSHVLAFTSNLEAFNPGVAEWRQ
DISRVVKDSMVQVTGISGEQLLVSVLPGLPTAAEFCIVPEKRSTEGRMDGKVTHLEQLFL
VLLSALNQDLIQFTLRPGVQINVYATRLSPAPLVDTSESGHNGATVIMLVTVVFVGLAVF
VICKFKRKIPGINIHTDERSEKQQKVIPSVASIAVPNPEGDMVSTLEHLDTGPDARGIGY
LPSHTDIKLSDETPHVF
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgaattgttttggaagagaaaatagacttaaacaacatgagtttggagaaagttttagg
agccgtggaaggcgacgaaagcgtagcttccagacggcggagagcagagcaacttggtcc
ggattcagatggaacggtgaagatgcgtcaacctccgatcaacatgatgagtttaaagtc
atttgttctacattcgcactcaccggggattcagctcataaccaagccatggtgcattgg
tccggccaaaatagcagtgtgattctaatgctgactaagtactttgacttcagccttggc
agtgtcacagagagctctctatggaggtcaacagactatggaacctcatatgagaaactt
aatgaaaaggttggaccaaaaaccatactaagctacttgtacgtgagtccgaataacaaa
cggaagatcatgttactgactgacctggaggtggagagcagcctgctcattagccttgat
gagggtgcatcctatcagaggtaccacttagccttcgacatcatcagcctcctcttccac
cccgagcaggaggactggatcctggcttacagccacgaccaaaagctctatgtctctgtt
gaatttggaagaagatggcagctcgtgcatgagagtgtagtccccaacagattttactgg
tcaaaattgggtttggacaaagagccaggaatgattcacttggagaccagtgtttctgac
agacggtcccagtatataacgtgtaagctgcagaactgctcagaggccaacaaaggcagg
cctttccctggatttatcagccctgattccctggtggttcaggaccagtatgttttcatt
caggtaccaatgggtggacggcctgtccattatgtgtcttacaaaagaaataccttcttc
cccatgaagctacctaagtacatattgccaaaggacttgcagataatcagcattgatgat
aaccaggtggtagcagcagtgcaggactggcaccagaatgactcctacaacctgtacatg
tcagaggcccgtggactcttcttcactctggccctggagaacatagtgagcagtgtggga
ccagagggcaacgtcatgatagacctctatgaggtagcagggataaaagggctgttcttg
tcaaataaagttgttgaggaccaagtgaaaacgtttatcacttacaataaggggcgagac
tggaatcttctacaggctcctaccactgatctgaagggaaccagactctactgtgtacag
ccctactgttcattacacctgcatcttcatgtgtctgacaacccgtacacatctggaaac
atagtcagcaaagaatcagctccaggaattatagtagcatcaggtaccattgggcctgag
cttaccacctataatgtcagcattttcatcacctcagatgctggcaacacttggagagag
gtatttgaggaggagtatagtatcctctttcttaaccagggtggtgccctagtggccatt
cgacacacacctctccccatcagacatatctggctcagttttgatgagggaaaacgctgg
aacaaatacagcttcaccccctctcctctctatgtagacggagtcttaggagagccaggg
gaagacaccctcatcatgacaatatttggccatttcagccatcgttctgagtggcagctt
gtcaaaattgacttcaggtccatctttaacagaaggtgcaacacagacgactatcagacc
tggcagttacacaatgacggtaaagtctgcattatgggagtgaagagaatcttccagaat
ctgaagcccgacaccagatgtgtcaaaaccagagatcagtacatctcccagatgtcagac
tcctgtccatgcactgaggctgactttgagtgtgattatggctttgagaggcagagtgat
ggaggatgcacccctgtcttctggtttgttccatcctctgtgtccagagactgcaccacc
ggagacagtttcctcaacactactggataccgtaaggctctgtccaataactgcactgcg
ggaaccctggggaagtatagccctaggagccaaaggtgtccccgccaggcccccagaggt
ctgcagctggtcaccagtgaggggacacttacagccaccatgggggacaacgtcaccttc
ctggtgtttctggaggagggtgatggctccataacaagtataacagtggactttggagat
gggatggccatatcctacgctaacatcagctccatagaggatggagtcaaacatatctac
agtaaagtgggcatttaccaagtggctgccacagcactcaacagcctgggctctgagaga
gtcttactatacctacatgttacctgtctacttgagcaagtgcagctttcagctccctca
gtggttgttaggaatgaagcagtgaatctaacaacagtcctaaagccaagttacgttgga
acagtcacctactactggtggttcaacaaccacactgagcctgtcatgactttagtggga
ggaatgtccttcaccttctccaaggagggaacccatactgtcactgtgcaagtgtcagtt
ggcaacaccttccttcaagacaaaataactgttgcagtctatgaatatttccggtcacac
gttttagccttcacctctaatctggaggccttcaatcctggtgtggctgaatggaggcag
gacatcagtagagtggtcaaggactccatggtccaagtcacagggatcagtggagagcag
cttctagtgtcagtgctcccagggttgccaacggcagcagagttttgcatcgtccctgag
aaaaggtcaacagaggggagaatggatggaaaagtgacacatttagagcagctcttttta
gtcctgctaagtgctctgaaccaagacctcatccagtttactctgcgccctggggttcag
attaacgtctacgccacacgactgtctccagctcctctcgtggacactagtgagagtggt
cacaatggtgctacagtcattatgctagtgacagtcgtatttgtgggtttggcagttttc
gttatctgcaagttcaaaaggaagatccctggcatcaacatccacacagatgagcggtca
gagaaacaacagaaagtgatcccttcggtggcatctatagctgtcccaaaccctgagggg
gacatggtgagcactctggagcacttggacacagggccagatgcacgtggcataggatac
ctgccatctcacacagacatcaaactctcagatgaaactccccatgtgttttaa
DBGET
integrated database retrieval system
