KEGG   Coregonus clupeaformis (lake whitefish): 121536139
Entry
121536139         CDS       T08357                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cclu04121]
    121536139
Enzymes [BR:cclu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     121536139
Ubiquitin system [BR:cclu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    121536139
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf_RING_Vps8 Prok-RING_4 zf-RING_4 RING_XB3-XBAT31 zf-rbx1 zf-C3HC4_4 TerY_C zf-UDP IBR_1 zf-RING_11 zf-RING_10 IBR zf-Nse Zn_ribbon_6 zf-RING_6 zf-RING_16 DZR Rtf2
Other DBs
NCBI-GeneID: 121536139
NCBI-ProteinID: XP_041699361
LinkDB
Position
2:8457687..8461271
AA seq 188 aa
MSSTTQRKRRTGAPSSSRRTAKSSRVTTTVPPRAAAAAETIAVLESSRTSSEEVVDLTCE
GSDPTVVDLTNNDSVVVFDEGLRGRRGAGGESYVLSSDEEGDTNGGLSADLLSSLQASSS
ARSTPGTVSCPVCMDAYAEIIESGRLVVSTKCGHLFCSQCLRDSLSRSHTCPTCRKKLTH
KQYHPIYI
NT seq 567 nt   +upstreamnt  +downstreamnt
atgagcagtacaacacagaggaagagaaggactggagccccctcaagttccagacgcaca
gccaagagtagcagagtcaccaccactgtgccacctcgtgcagcagccgctgctgagacc
attgctgtgctggagagcagcaggactagcagtgaggaggtggtggacttgacatgtgaa
ggttctgatccaactgtggttgacttgaccaacaatgattctgtggtggttttcgatgaa
gggcttcggggcagacgtggagctggcggtgagagttacgtgctgagcagtgatgaggag
ggggataccaatggaggcctcagtgctgacctcctatcctctctacaggccagcagtagt
gccaggtctaccccaggtacagtcagctgcccagtgtgtatggatgcctatgctgagatc
attgaaagtgggagactagtggtctccacaaaatgtggtcacctgttctgcagtcagtgc
ctccgcgactcactgtcgagatcccacacttgcccaacctgcagaaagaaactcacccac
aagcaataccaccccatatacatctga

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