Coregonus clupeaformis (lake whitefish): 121536156
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Entry
121536156 CDS
T08357
Symbol
rbm44
Name
(RefSeq) RNA-binding protein 44
KO
K25080
RNA-binding protein 44
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121536156 (rbm44)
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Other domain-containing proteins
RRM domain-containing proteins
121536156 (rbm44)
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Gene cluster
GFIT
Motif
Pfam:
wHTH_TTC3
RRM_1
TTC3_9th
zf-tcix
Zn_Ribbon_1
DZR
DUF7577
RRM_PARP14_3
Zn_ribbon_3
Motif
Other DBs
NCBI-GeneID:
121536156
NCBI-ProteinID:
XP_045062356
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All DBs
Position
23:complement(28284297..28295148)
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AA seq
1134 aa
AA seq
DB search
MWYPFPVLMPLPLSPEPQRPSDISQTPCASGMIQIHMVPYEQRFLPNAMNGLAAPPSLLI
EDCRKFLLNRSVFDLVKVTHFLELTDPKLLGWYLSLPVEDRKLIQEEGGLHQFLQRHPAL
EVARQLVYVKQQVRGCWKPPAVMQTMSSNLNKSRRPTFYGVIQCPNCGTSCSSGAKICRR
CSTPIQKEIPACQSEEEKELGLLPNNLKEELNLFNCSGNGVQSVQVHHQVAAGAVQQFRR
CQPQSFTTTTFPSTAVGCLVNLQDSFQSACGDTSGGHIGATENSPGQQEAHCSKVQLLSQ
LWQDGNNRSSVVVCKDPSAQANFSLDMELEIQSQRGINRSQSTIESQEGESMANSKSMHD
QTADFPMLDRETPPEYYSFNSTRMDRTEWNDTSINTSPSAEPDHDDSLSLMATMGSTEQP
SGAEEAETPEGSMVSSCAGDLSEYCDWTYDNCPGNLPNEEEASRCELENDGVDYQSIMEE
DGSILMYKASNEGTPDLNATRPQGQTKMDQSGWSRESLSAPQTPKREEQSIYEESFVSIS
PGAAAAVVTPTQHGNGMSVSSLVNLNQTFDISPSRVTGARLSTADHSTNTSPAVTKHDIL
VGIDHSLTGCNQNTQTRGTTTTDKYVITEVHMADLDYLTEEFIKLKFAQEELKELKEKMA
SSAGGVSVRDGRGCGDADRGECDCVQRARRAELSLLALQYWMCQRHCWSRYYTSPEGDRL
VQGTEGPPESLVKVLQVLEVDYREMRRQVLSGIPLDQLRPLSVDSQRITSGTSYVPQQIV
DESLGNALSDVSDRSSQQLLVEDARVEDVSVVGEGDGELNRLVSQSVLSVLGQDDGMVGR
MKAEGPVGNPKAEDCRSGKAVTLLPQQPVVNRGPRPGGTKDHNSSEAWYDAEEDLEPDGV
ELKEGGLAEVPEEEGNGVVGEKDQSSFLCVTDLPSDVTEREVMLWFEKYQASEVSISTFS
NNLRVAIVTVSGPKMADSALSEMDGCNMQGHTVHVVHICRPSHTGSQGQGGQTQQQPGPS
ASTKAGPSGDAPGPQDSKSKNTHITTPLKPLQLSLQKRTTVCDSPTASGTCVPQHYATMG
SFDTLMAQLSERHPEAGRQRIVDALLELRAKHQGFLSGLPLKTIVNMTSDLLTR
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgtggtatcctttcccagtgctcatgccattacctctgtcgccggagccacagcgtcca
tcagatatttcacagacaccctgtgcatcagggatgattcagatacatatggtaccttat
gaacaacgtttccttccaaatgcaatgaacgggttggctgcccctccgtctttgttgata
gaggactgcagaaaattccttctcaacaggtctgtgtttgacctggtgaaagtcacccat
ttcctggaactgacagaccccaagctgctgggttggtacttatccctgcctgtggaggac
aggaagctcatacaagaggaaggaggactccatcagtttctgcagaggcatcctgctctg
gaagtagccagacaactggtttatgttaaacaacaggtgagaggttgctggaaacctcct
gctgttatgcagacgatgtcatcaaacctaaacaaatccagaaggcccacattctatggt
gtgattcagtgtcccaactgtggaaccagttgttcctctggagctaagatatgccgacgc
tgtagcacacctatccagaaggagatcccggcatgccagtcagaagaggagaaagagtta
ggtcttcttcccaacaacctgaaggaggagctaaatctgttcaactgttcagggaatgga
gtccagtcagtccaagtccaccaccaggtggcagcaggagcagtgcagcagttcaggaga
tgtcagcctcagtcctttactaccactaccttcccatccacagcagtgggctgtctggtc
aaccttcaggatagcttccagtcagcctgtggtgataccagtggcggccatattggagcc
acagagaattctccaggccaacaggaggcgcactgctccaaggtccagctgctctctcag
ctgtggcaggatggcaacaaccgcagtagtgtggtggtatgtaaggatccgtccgcccag
gctaacttctctttggatatggagctggagatacaaagccagagaggaattaacaggagc
cagtctaccatcgaaagccaggagggtgagtccatggccaactccaagtccatgcatgac
cagacggcagacttccccatgttggaccgggagactcctccagagtactacagcttcaat
agcacaaggatggaccgcacagagtggaacgacaccagcatcaacaccagcccgtcagcg
gagccggaccacgacgactcactatcactcatggccaccatggggagcactgagcagcct
agcggagcagaggaggcggagacacctgaaggcagtatggtgtcttcctgcgcaggagac
ctcagcgagtactgtgattggacctacgacaactgccccggcaacctaccaaatgaggaa
gaggcctcaagatgcgagctagagaatgatggcgtcgactaccagagcatcatggaagag
gatgggagtattctcatgtataaagcaagtaatgaggggacacctgacttaaacgcgaca
cgcccacaaggccaaaccaagatggaccagtccggttggtctagagagagtctcagtgca
ccccagaccccgaagagagaggagcagtccatctatgaggagtcctttgtgtccataagc
cctggtgcggcggcggccgtcgtgacccccacacagcatgggaacggtatgtctgtgtcc
tctctagtcaacctgaaccagacttttgatatctctccttcacgggtcacaggagctaga
ctgagcacagccgaccattcaacaaatacttcgcctgccgtcaccaaacatgacatcttg
gttggtattgaccacagtctaacaggctgcaaccagaacacacaaactcggggcacaact
acaactgacaagtatgtcatcactgaagtccacatggcagacctggactatctcactgag
gaattcatcaagctgaaatttgctcaagaggaactgaaagagctgaaagagaaaatggca
agctctgcaggcggtgtgagtgtgagagatggaagaggctgcggtgacgcagaccgtggt
gaatgtgactgtgtccagcgtgccaggcgggcagagctgagcctgctggccctgcagtat
tggatgtgccaacggcactgctggagtcgctactacacctcacccgagggagaccgtctg
gtccaggggactgaggggccgcctgagagcctggtgaaggtgctgcaggtcctggaggta
gactacagagagatgaggagacaggtcctgtcaggtatacccctggaccagctcagaccc
ctgtctgtcgactcccagaggatcacctcagggaccagctacgtcccccaacagatagtt
gacgagtctttgggaaatgctctgtctgatgtctcagataggagctcccagcagttgctg
gtagaggatgcccgcgtagaggacgttagtgtagttggtgaaggagatggagagttaaac
agactggtgtcccagtctgttttatcagtccttggacaggatgatgggatggttggcagg
atgaaggcagaagggccagttggtaaccccaaggctgaggactgcaggtctgggaaggca
gtcaccctcctcccccagcagcctgtggtcaaccgggggcccaggccaggtggaaccaaa
gaccacaactctagcgaggcgtggtacgatgcagaggaggaccttgagcctgatggtgta
gagctgaaggaaggaggtctggctgaggtcccggaggaggaaggaaatggagtggttggg
gagaaggatcagagctccttcctgtgtgtcacagacctacccagtgatgtaacggagaga
gaagtaatgctctggtttgagaagtatcaagcatctgaagtgagcatttccaccttcagc
aacaacctccgagttgccatagtgactgtgagtggtccaaagatggctgacagtgcattg
agtgagatggacgggtgcaatatgcagggacacacggtgcatgtggtgcacatctgcaga
ccaagccacactgggagccagggtcagggggggcaaacccagcaacagcctggtccctca
gccagcaccaaggcagggccctctggagacgccccaggcccccaagactccaagagcaaa
aacacccatatcaccaccccactgaagcccctgcagctcagcctccagaagaggaccacc
gtgtgtgactcccccacggcgtcggggacctgtgtgccccagcactacgccaccatgggt
agcttcgatacactgatggcccagttgtcagagcgccacccagaggcggggaggcagagg
attgttgacgccttgctggagctgagggccaaacaccaggggttcctcagcggcctgcct
ctcaagaccattgtaaacatgacctctgacctgctgacacgataa
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