Coregonus clupeaformis (lake whitefish): 121536271
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Entry
121536271 CDS
T08357
Name
(RefSeq) activin receptor type-1C-like
KO
K13568
activin receptor type-1C [EC:
2.7.11.30
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121536271
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121536271
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
121536271
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.30 receptor protein serine/threonine kinase
121536271
Protein kinases [BR:
cclu01001
]
Receptor serine/threonine kinases (RSTK): TKL group
TGFBR1 family [OT]
121536271
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Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
TGF_beta_GS
Activin_recp
Pkinase_fungal
FTA2
Motif
Other DBs
NCBI-GeneID:
121536271
NCBI-ProteinID:
XP_041699471
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Position
23:complement(18626719..18689694)
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AA seq
496 aa
AA seq
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MINPRLHTVEAALIFISVAQLSTALKCVCQLCANNTCETGADGACWNSVMLINGKEEAVK
SCLSPAEMRGQVFCYSSRNVSKRNCCFTDFCNNETLHLHPGYVERPSEEPGWGRLELAAV
ILVPSALLCVSILLGVCVMQGQLCAYNRAHKNDVDEPLDDQSLMSPDKCIKDLIYDMSTS
GSGSGLPLLVQRTIARTIVLQETIGKGRFGEVWRGKWRGEDVAVKIFSSRDERSWFREAE
IYQTIMLRHENILGFIAADNKDNGSWTQLWLVSEYHEHGSLFDYLNRYTLSVDGMIVLAL
SITSGLAHLHMEIIGTQGKPAIAHRDIKSKNILVKKNGTAVIADLGLAVKHDSSTNTIDI
PSNHRVGTKRYMAPELLDDTINMSSFESFKRADIYSLGLVFWELARRCSVRGLQEDFQLP
YYDTVPSDPSVEDMRKIVCDQKLRPNIPNQWQSCEALRVIGKLMRECWYANAAARLTALR
VKKTVSQVTVLKDIKD
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgattaatcccaggctccacacggtagaagcggcgttgatatttatatccgttgcacag
ctgagcacagctctgaagtgtgtgtgccagctatgtgccaacaacacctgtgagacgggt
gcagacggggcctgctggaactctgtgatgctgatcaacgggaaggaggaggccgtcaag
tcctgtctgtccccggccgagatgaggggacaggtcttctgctacagctcccggaacgtc
tccaagagaaactgctgcttcacagacttctgcaacaatgagaccctgcatctgcatcca
ggctatgtagagaggccatcggaggagcccggctggggcaggctggagctggcagcggtc
atcctggttccctctgccctgctgtgtgtgagcatcctgctgggggtgtgtgtgatgcag
ggccagctctgtgcctacaacagggcccacaagaatgacgtggacgagcccctggatgac
cagagtctcatgtcccccgacaagtgtattaaagacctcatctacgacatgagcacgtca
ggctcaggctctgggctgccgctgctggtacagcggacaatagctcggaccatcgtgctg
caggagaccattgggaagggccgcttcggggaggtgtggcgagggaagtggcgaggggag
gacgtggcggtgaagatcttttcatcccgagacgagaggtcctggttcagagaggcagag
atctaccagaccatcatgctccgacacgagaacatcctgggattcatcgcagccgataac
aaggataacggctcttggactcagctgtggctggtgtcagagtaccacgagcacggctct
ctgtttgactacctgaacaggtacactttgtctgtggacggcatgatcgtcctggccttg
tccatcaccagcggcctggcacacctccacatggagatcattggcactcaggggaaacct
gccattgcccacagagacatcaagtctaaaaacatcctggtgaagaagaatgggacagct
gtcatagcagacctgggattggctgtgaaacacgactccagcaccaacaccatcgacata
ccgtccaatcacagagtaggaacaaagaggtacatggccccagaactgctggatgacacg
atcaatatgagcagctttgagtcattcaagcgggccgacatctactccctgggcctggtg
ttctgggaactggcacggaggtgctccgtcaggggacttcaagaagatttccagttgcct
tactatgatacggtaccttcagatccctctgtggaggacatgagaaagatcgtctgtgac
cagaaactgagacccaacattcccaaccagtggcagagctgcgaggcactgcgggtgata
ggcaagctgatgcgtgagtgctggtacgccaatgctgcagctcgcctcaccgcattgagg
gtcaagaaaaccgtctctcaggtgactgtactcaaggacatcaaagattag
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