Coregonus clupeaformis (lake whitefish): 121536304
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Entry
121536304 CDS
T08357
Name
(RefSeq) general transcription factor IIF subunit 2-like
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121536304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121536304
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
121536304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
DUF4952
Motif
Other DBs
NCBI-GeneID:
121536304
NCBI-ProteinID:
XP_041699510
LinkDB
All DBs
Position
Unknown
AA seq
252 aa
AA seq
DB search
MSEKTEVDLTGAKQNTGVWLVKVPKYLAQQWAKAPGKGEIGKLKIVKIQGKADVLFTLNE
DLTSLSAMGEKAASVRAPRDHPFTMHSVGGQTLAVFTETSADKISLEGIVVQRAECRPAV
NQNYMKLKKLQIEVSTKPQRLTEQMDKAVTNNFKPVSNHVANVECEKKKKTEGRMVRAER
QQVMDMLFSAFEKHQYYNIKDLVVVTKQPVTYLKEILREIGVYNAKGTHKSTWELKPEYR
HYQGGEEEIKSD
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaaacggaggttgatttaaccggagctaagcaaaacaccggtgtatggcta
gtaaaggttcccaagtacctggcccagcagtgggccaaagcaccaggaaaaggagaaatt
ggaaagctcaagattgtaaagatacaaggaaaagcagatgtgttgttcacactgaatgag
gacctgaccagcctgtctgccatgggggagaaggcagcgtcggtacgagcccccagggac
cacccattcaccatgcatagtgtgggggggcagaccctggctgtgttcactgagacctct
gcagataagatcagtctggagggcatagtggtacagagagcagagtgcagacctgccgtc
aaccaaaactacatgaaactgaagaaattacagattgaggtgtctaccaagccccagcgt
ctgaccgagcagatggacaaggctgtcaccaacaacttcaaacctgtatccaaccatgtt
gctaacgtagagtgtgagaagaagaagaagactgaaggtaggatggtgagggcagaaaga
cagcaggtgatggacatgctcttctccgcctttgagaaacaccagtactacaacatcaaa
gacctggtggtggtcaccaagcaaccagtgacctacttgaaggagatcctgagggagata
ggagtgtacaacgctaaaggaacccacaagagtacatgggaactgaagccagagtaccgc
cactaccagggaggagaggaggagataaagagtgactag
DBGET
integrated database retrieval system
