Coregonus clupeaformis (lake whitefish): 121536333 Help Entry 121536333         CDS       T08357                                  Name (RefSeq) THO complex subunit 3   KO K12880   THO complex subunit 3 Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu03013   Nucleocytoplasmic transport cclu03040   Spliceosome Brite KEGG Orthology (KO) [BR:cclu00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     121536333   09122 Translation    03013 Nucleocytoplasmic transport     121536333  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cclu03019]     121536333    03041 Spliceosome [BR:cclu03041]     121536333 Messenger RNA biogenesis [BR:cclu03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      121536333 Spliceosome [BR:cclu03041]  Complex C   Other components    EJC/TREX     121536333  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     121536333 SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_Aladin Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_Vps41 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_EML DSE1_N RMC1_N Beta-prop_WDR36-Utp21_1st Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_NOL10_N eIF2A Beta-prop_TEP1_C Beta-prop_HPS5 NBCH_WD40 Tricorn_2nd PD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th TRM82_WD Beta-prop_SPT8 Beta-prop_ACSF4 ASA1 B-prop_COPA_B_2nd Beta-prop_EIPR1 PAC11 Beta-prop_NUP159_NUP214 Beta-prop_WDR75_1st Peptidase_S9_N DPPIV_N Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_ELP1_1st Beta-prop_WDR11_1st Cytochrom_D1 WD_LRWD1 YNCE Motif Other DBs NCBI-GeneID:  121536333 NCBI-ProteinID:  XP_041699544 LinkDB All DBs Position 2 Genome browser AA seq 322 aa AA seqDB search MASKYYQEMQESFRNNNKSREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFVLEKDRL VKENNYRGHGDSVDQLCWHPTNPDVFVTASGDKTIRIWDVRTTKCTATVNTKGENINICW SPDGQTIAVGNKDDVVTFIDVKSHRSRAEEQFKFEVNEISWNNDNDMFFLTNGNGCINIL SYPELKPIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWTVEELVCVRCFSRLDWPV RTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCESPTFTVAWHPKRPLLAYACDDK EGKYDSNRESGTVKLFGLPNDS NT seq 969 nt NT seq  +upstreamnt  +downstreamnt atggcgtccaaatattatcaagagatgcaagagagttttagaaataacaacaaaagtagg gaattccctgcgcatagcgctaaagttcattcagtagcatggagttgcgatggcaggagg ttggcatctgggtcttttgataaaacagcaagcgtatttgtcttggaaaaagaccgtttg gtgaaggagaacaactacaggggccatggagacagtgttgatcagttgtgttggcatcct accaacccagacgtgtttgtcactgcatcaggggacaagaccatacgcatctgggacgtc aggacaacaaagtgcacggctacagtcaacactaaaggggaaaacatcaatatctgctgg agtccggacggccaaacgatagccgttgggaacaaggacgatgtggttaccttcatcgac gtcaaatcacaccggtcgcgagccgaggagcagtttaagtttgaagtcaacgagatctca tggaataatgacaacgacatgttctttctcaccaatggaaacgggtgcatcaacatcttg agttaccctgagctgaagcccatccagtcgatcaacgcccatccctccaactgcatctgc atcaagtttgacccgacggggaagtactttgccacaggaagtgcagacgccctcgtcagt ctgtggaccgttgaagaactggtctgtgttcgctgtttctccaggttggactggccagtg aggacgttgagtttcagccatgatgggaagatgctggcttcagcttccgaagaccacttc atagatatagcggaggttgaaacaggagagaagctgtgggaggtccagtgtgagtcccct acgttcacagtggcctggcatcctaagagaccgctgctggcgtacgcatgtgatgacaag gaagggaagtatgacagcaatagagagtcgggcactgtcaaactgtttggattacctaat gattcctga

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