Coregonus clupeaformis (lake whitefish): 121536345
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Entry
121536345 CDS
T08357
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B-like
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121536345
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
121536345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121536345
04090 CD molecules [BR:
cclu04090
]
121536345
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Tumor necrosis fators
121536345
CD molecules [BR:
cclu04090
]
Proteins
121536345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
DUF2335
Motif
Other DBs
NCBI-GeneID:
121536345
NCBI-ProteinID:
XP_041699554
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Position
23:complement(42586215..42590852)
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AA seq
302 aa
AA seq
DB search
MSCSLCDYGGGCLVPVMVSAGPSSEDVGPVPRQESGGRRLSWPVLLLTLAAVTSSSLSAL
SLFHLLALRAEVEGLRSEVFRRREEQQEARHEETLQQMSSSSRTRRSSSDPPHPPEPQPP
PHTPDPQPLPHPTDPQTRLSFIRKRSVGTGLKNTVSQPCLQMLADSNRKTFQKEFALEPH
TGIPWQEGLRRGSALEAESDSILVREEGYYFVYSQVYYMDRTFAMGHVVNRKKRNVVGDE
AQHVTLFRCIQNMNPVYPYNTCYTGGIVKLEVGDSVELLIPRSTANISLDGDSTFLGAFR
LV
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgcagtctgtgtgactacggaggaggctgtctggtccctgtgatggtgtctgca
ggtccaagttctgaggatgttggccctgtgcctaggcaggagtctggcggtcggaggctg
tcctggccggtcctgctgctgaccctggcagcggttacctcatcgtctctctcagcccta
tctctgttccacctgctggccctcagggctgaggtggaggggctccggtcagaggtcttt
cgcaggagagaggagcaacaagaggccaggcacgaagagacactgcagcagatgagcagc
agctccagaaccaggaggagcagctcagaccctccacacccccctgaaccccagccccct
ccacacacccctgacccccagccccttccacaccccactgacccccagactaggctgtcc
ttcatcaggaagaggagtgtgggcacaggacttaagaacacagtgtctcaaccctgtcta
cagatgctggcagatagcaacaggaaaacattccagaaagagtttgcgttggagcctcac
acagggatcccctggcaggaggggcttaggagaggctccgccctggaggcagagagtgac
agcattcttgtcagagaggagggatactactttgtctacagccaggtgtactacatggac
aggacctttgccatgggtcatgtggtgaacaggaagaagaggaacgttgtgggagatgaa
gctcagcatgtcacactgttccgctgtatccagaacatgaaccctgtctacccatacaac
acctgctacacagggggtatagtgaagctggaggtcggggacagtgtggagctgctgata
cctcgctctacagccaacatttctctggatggagactctactttcctgggggcctttaga
ctggtctga
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