Coregonus clupeaformis (lake whitefish): 121536357
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Entry
121536357 CDS
T08357
Name
(RefSeq) FHF complex subunit HOOK interacting protein 1B-like
KO
K26420
FHF complex subunit HOOK interacting protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121536357
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121536357
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
FTS/Hook/FHIP (FHF) complex
121536357
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
FTS and Hook-interacting proteins (FHIP)
121536357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAI16-like
DUF5917
KELAA
Motif
Other DBs
NCBI-GeneID:
121536357
NCBI-ProteinID:
XP_045062702
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All DBs
Position
23:55123332..55232380
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AA seq
1170 aa
AA seq
DB search
MSWLSRLTPRGPGSKSSRKVAPSSPCTADPETCLMVFENHWRQLSWVLEQQDPSGSSDDL
TAVRNHTDQMLCLLAEERPGEGGEGPSGAVTSGNVPPMGPILDLVVTENVLERVVQWHLR
RGLDPDSQGALLKLFEMLIGHSQQPLLQHKAVLQPLLGLLGACTDPQLGCPPSLENSLVL
LLNQICVSMARAPAVLELLFRTAPAQQGPTNLLIFSLLIPFLHRDGAIGQQARDALLLVM
ATSASNQGVACYIAENSYFCPVLATGLSALYSSLPRKIEVRGDDWHALRREDWMGVSSLM
LFMNSLEFCNAVIQVAHPLVRRQLVDYVHNGFLVPVMGPALHKSSVDEMIASTAYLDLFL
RSVTETALLKTFLRFILMHRHDNDTILDTLLTRISSNSRLCMVSLSLFRTLLSLNCEDLM
LQLVLRYLVPCTHVMLSQRRAVRETDLYGKSADKFLSLIPECCRLSTLPPAEREEEPALC
GKVLNSPSSESPVHPKPSTPSRLALFMRQQSTALPSTPSPTKTDPSSPRGGPSTPLSPDS
PMHPVPEGLDWESGYLEYLRDARRGVELCSWACRNWSAPYDGEDPSPNMAPLPPPIPTSN
PSLAMFPEHFSFQQGGGGGGGGGGGGSNSPGQQRAAVVAAARSEWTSTERDSGEWDVTIC
KNNCSISLTPRTKKRCLQREEVTLPKPLHLLPDSTSASVPDPSALTTGPHQAVFNGDSQD
GGMEVKKVKRDLGEQRQPAGGDSSRNVVVGACPTPAQSCGALQGLHSEGNCSVAGESSRG
LPPHIQSHTQHQPTPRPSATRTNSSNVSLTPQVHIPAPGPGSGSGRPEATLSNQSEAVER
LISELLDGAGPGEEGQPGPGDSNSQGISIEAFTQELRELEERVMERSRGAGLLRQLEETT
RDPLPEEPPPPSPLDTDLMGTGAGVELKGVGSAVGVFSPARPLGQSSSQPYTGPFMVVLF
AKLENMLQNSLYVNILLTGILGQLACYPQPLLRSFLLNTNMVFQPSVKSLIQVLGSVKNR
IEVFAASHEDFPAMLRKAQRYLAARGKVDWANSSPMGVPTLRRSDSLVKSRKPSLGDLIL
RHTNSPTRARHAAQLALAHVRDGSQSLHSALFRGGTGGGVSGLEKQAEALRVKNAVYCAV
IFSEFLKELAALAQEHAVSMLFLQSQDTEE
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttgagccggctgacccctcggggtccggggagcaagtccagtaggaaggtg
gctccctccagtccctgtactgctgacccagagacctgcctcatggtgtttgagaaccac
tggagacagttgtcctgggtgctggagcaacaggacccatcaggttctagtgatgacctc
accgcggtgcggaaccacaccgatcagatgctgtgcctcctggctgaggagcgaccgggg
gaggggggcgagggcccctccggggcggtaacgtccggtaacgtcccccccatgggcccc
atcctggacctggtggtgactgagaacgtcctggagcgtgtggtgcagtggcacctgcgt
cgtggattggaccccgacagccagggggcgctactcaagctgtttgagatgctgataggc
cattctcagcagcccctgctccaacacaaggcggtgctgcagcctctgctgggcctgctg
ggggcctgtactgatccccagctgggctgtcctccctctctggagaacagcctggtgctg
ctgctcaaccagatctgtgtgtcgatggcgcgtgctcctgcggtgttggagctgttgttc
aggacggcgccagcccaacagggtccaaccaacctgctcatcttctccctgctgatcccc
ttcctccaccgtgacggggccatcggacagcaggcccgcgacgccctgctcctcgtcatg
gcaacctccgccagcaaccagggcgtggcatgctacatcgcagagaactcctacttctgc
ccggtgctggccacaggactcagtgctctctactcctctctgcctaggaagatagaggta
cggggggatgactggcacgctctgcggagggaggactggatgggcgtgtcctccctgatg
ctctttatgaactctctggagttctgcaacgctgtcatccaggtggcacaccccctggtc
cgcaggcagctggttgattacgttcacaacggcttcctggttcccgtcatgggacccgcc
ctacacaagtcatctgtagatgagatgatagccagtacagcctacctggatctgttcctg
cgcagcgtcacggaaacagctctcctcaaaaccttcctgcgcttcatcctcatgcatcgc
catgacaacgacaccatcctggacaccttgctgactcgcatcagcagcaattcaagactg
tgtatggtgtctttgagcctattcaggactctgctctctctcaactgtgaagacctcatg
ttgcagttggttctcaggtatcttgtgccctgtacccatgtgatgttgagtcagaggcgt
gctgtcagggagacggatctctatggtaaatcagctgacaagttcctgtccctcatccca
gagtgctgccgccttagcacactgccccctgctgagcgggaggaagaacctgctctctgt
gggaaagtactgaatagtcccagctcagagtctcccgtacaccccaaacccagcactccg
tcccgcctggccctcttcatgcgccagcagagcactgcactgccctccaccccctccccc
actaagacggacccctcgtccccccgcgggggccccagcacccccctgtcccccgacagc
cccatgcaccccgtcccagaggggctggactgggagtcggggtacctggagtacctcagg
gacgcccgtaggggggtagagttgtgctcctgggcctgccggaactggtcagccccctat
gatggagaggacccctcgcccaacatggcccccctaccgcccccaatccccacctccaac
ccctccctggccatgttcccagaacacttctccttccagcagggaggaggaggaggtggt
ggtggtggaggaggaggtagtaactctcccggccagcagagggcagcggtggtggcagca
gcgcggtcagagtggaccagtacagagagggacagtggagagtgggacgtcaccatctgt
aagaacaactgttctatcagcctcacgcctcgcaccaagaaacgctgcctgcagagagag
gaggtcaccctccccaaacctcttcatctccttcccgactctacctctgcctccgttcct
gatccctccgccctcaccacaggccctcaccaggccgtcttcaatggggacagccaggat
ggagggatggaggttaagaaggtgaagagagatttgggtgagcagcggcaacctgcgggg
ggtgactctagtcggaacgttgtggttggtgcctgccctaccccggcccagtcctgtggg
gccctacagggcttgcacagtgaagggaactgcagtgtggctggggaaagctccagaggt
cttccaccacacatacagagtcacacccagcatcagcctactccacggccctcagcaacc
cgtaccaactcctccaacgtcagcctgacccctcaggtccacatccctgcacccggccct
ggatcgggatcgggacgtccagaggcaacgctctctaaccagtcagaagcagtggagcgg
ctgatctctgagctcctggatggggctgggccgggggaggaggggcagccggggcctggg
gactccaacagccagggcatcagcatcgaggccttcacccaggaactccgggagctggag
gagagggtgatggagaggagcaggggggccgggctgctcagacagctggaggagaccacc
agagaccccctcccagaggaaccaccgcccccctcgcccctggacactgacctgatgggg
actggggctggagtggagctcaagggagtggggtcagctgtgggggtgttcagccctgcc
aggcctctaggacagtcatcctctcagccctacacaggtccgtttatggtggttctgttt
gccaagctggagaacatgctccagaactctctgtatgtgaacatcctgctgacagggatt
ctgggccagcttgcctgctaccctcagcccctgctccgatccttcctcctcaacaccaac
atggtgttccagcccagcgtcaagtctctcatacaggttctgggctcagtgaagaaccgc
attgaggtgtttgcagcgtctcatgaggacttccctgccatgctgaggaaagcccagcgc
tacctggctgccaggggcaaggtggactgggccaactcctcacccatgggggtacccacc
ctgcgacgctctgattccctggtgaagagccggaaaccttcgctaggcgacctgattctg
cgccacaccaacagccccacgcgggcacgccacgctgcccagctcgccctggcccacgta
cgagatggcagccaatcgctgcacagcgccctgttccggggtgggactggtggaggggtg
tcgggactggagaagcaggcggaggctctgagggtgaagaacgccgtctactgcgccgtc
atcttctccgagttcctcaaggagctggccgctctggcccaggagcacgctgtctccatg
ctcttcctccagagccaagacactgaggagtga
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