Coregonus clupeaformis (lake whitefish): 121536416
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Entry
121536416 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: HEAT repeat-containing protein 6-like
KO
K24815
HEAT repeat-containing protein 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121536416
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Other domain-containing proteins
HEAT repeat domain-containing proteins
121536416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4042
HEAT_EZ
HEAT_2
HEAT
Arm
Cnd1
UTP20_C
Adaptin_N
TPR_TTI1_N
IFRD
Motif
Other DBs
NCBI-GeneID:
121536416
NCBI-ProteinID:
XP_041699604
LinkDB
All DBs
Position
23:complement(10492762..10495775)
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AA seq
1005 aa
AA seq
DB search
MFPPPCSTPNIPPEEVCTLLIHVTHLVPLSQEHLVIKLCQLTHHLLNQLQVIVDEQTLDV
CVCYVVRALGVCSPWTHSEVLQALSTLIYGNGPRCNRHLSELLGDGGVLRLYSDPSQPDM
ELRRAALTCMANICLGVPGQASLEDPYRGLCFRVFLQTLQSPKPPDADELLYCTVIQGAV
KGLQSSLCGGKWRFGGQEELGALLAVLKRFMFHGCPGVGVEWPSVLYPAPLPQYETCSTP
KPPEPPRNPPTQTSGNKKKKSRGRGRKGGVDEEREAEPGLQRGGGGGEAWSKTPGAPPPA
VPSLYPLWKRSSSDSEFSDPEGAAHSKLRLFHGRVRQGVLLCLLAVVKAVERRTLYGYWS
SFIPDAPIGGPPPLTLLTVVLKDPSPKVRACALQVVSALLDGSRQFLGVAEDLAPPRTSY
TPFSFSLATAVRELHRSLSLALLAEASAHTLTQIIKCLAHLVCNAPYNRLRPGLLSPLWR
QIRPYLRHRDVNVRVSVLTLYGALVSTQAPLSEIQLLLTQPHTSQETALSWRQREGFSTP
SPHTPPSHKYHNSHTKQTHSPRGSHTPGEEEPGVPWLLQLCVSLVTQPRDDQSDSEGPGG
GATALEPSPVRLEALQVLAHLVRGYFPLCQACLCELGQLSARCLRETDPSIQLHEAKLLE
ELGTGIIQQYRADSSQAESCSVPISQVVQFWVDVLSGPLNGPDLQXLGLTYSDNSLVKAA
AVRALGVNILFPCLREDVMFVADTANAILTALDDRSPNVRSKAAWSLGNLTDTLIVNMEC
VGEVFQEELSDMLVLQMLQSATKASIDKDRVKSNAVRALGNLLHFLSVSQLTRPGFQRPL
EEAVSALVTTVQSEAMMKVRWNACYALGNAFRNPALPLDSASWSGDAFSALCCVVTSCQN
FKVRIKSAAALSVPACRHCYGDAERFGRVWRSLAAALEHSEETQDFLEYRYCSSLRHTLT
HALTHLLRLSQSQDMPALGVSLVMEKGRGFKEHLVKYLRGGGGTE
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgtttccacccccatgctccacccccaacataccacctgaggaagtgtgcacgctgctc
atccacgtgacccacctggttcctctcagccaggaacacctggttatcaagctatgtcag
ctcacacaccacctcctcaaccagctacaggtgatagtggacgagcagacgctggatgtg
tgtgtgtgttacgtggtccgtgcgctgggcgtgtgtagcccctggactcacagtgaggtg
ctgcaggctttgtctactctgatctatggaaacggacctcgctgcaaccggcacctgagt
gagttgcttggtgatggtggagtactgcgtctctatagcgacccgtctcagccagacatg
gagctgcgtcgtgctgctctcacctgtatggctaacatctgtctgggtgtcccagggcag
gcgtcactagaagacccctacaggggtttgtgtttcagagtcttcctgcagacgctccag
tcacccaaaccgcccgacgctgacgaactgctttactgcacggtgatccagggagcagtg
aagggcctccagtcctctctgtgtggagggaagtggaggtttggaggccaggaggaactg
ggagctctactggcagttctcaagaggttcatgttccatggttgtccaggagtgggtgtg
gagtggccgtccgtgctgtaccccgctcccctgcctcagtacgaaacctgcagcaccccc
aaaccccctgaacctccacggaacccccccacccagacctcagggaataagaagaagaag
tctcgaggacgggggaggaaaggaggagtggatgaggagagagaggcagaacccgggctc
cagagagggggaggaggaggggaggcctggtctaagacccctggagccccacctccggcc
gttccatccctctatccgttatggaagaggagcagctctgattcagagttctctgatcct
gagggagcagcacacagcaaactgaggttgttccatggcagggtgcggcagggtgtgttg
ctgtgtctcctagccgtggtgaaggcagtggagaggagaacgctgtatggctattggtcg
tcattcataccggacgctcccattggtggaccacctcctctcacactgctcactgtagta
ctgaaggacccttcacctaaggtgcgtgcgtgtgccctccaggtggtgtctgcgttgctg
gatggttcccgtcagttcctgggcgtggctgaagacttggctccgcccagaacctcttac
actccattctccttctccctcgccaccgccgtccgcgagctgcaccgctctctctccctg
gcgttgctggccgaggcctctgcccacacactcactcagatcatcaagtgcctggctcac
ctggtgtgtaatgctccgtataaccgtctgagacccggcctgctcagcccgctgtggaga
cagatacgaccctacctacgacacagagatgtgaacgtgcgtgtgtctgttctgacactg
tatggagcgttggtgtcgacccaagcccctctctctgagatacagctgctcctcacacag
ccacacacctcgcaggagacggcgctgagctggagacagagggaggggttttccacaccc
tcaccacacactccaccctcccacaaataccacaactcacacaccaaacaaacacactct
cctcggggctcacacactccaggagaggaggagccgggcgtgccctggctgctgcagctg
tgtgtgtcgcttgttactcaacccagagatgaccaatcagacagcgagggtccaggagga
ggggctacagctctagagccctccccagttcgcctggaggccttacaggtgctagcccac
ctggtgcgcggttacttccctctgtgccaggcgtgtctgtgtgagctggggcagctgagt
gcccgctgtctccgagagacagacccctccatacaactacacgaagccaagttactggag
gagttggggacaggtatcatccaacagtacagagcagacagcagccaggcagagagctgc
agtgtcccgatctcacaggtggtccagttctgggtggatgtattgagtggtccgttgaac
gggcctgacctacagntgttgggcctgacctacagtgataactctctggtgaaggctgct
gcagtcagagctctgggagtcaacattctgttcccctgtctacgagaggatgtgatgttt
gtagcagacacggccaacgccatcctgacagccctggacgaccgctcccccaatgtccgc
tccaaggccgcctggtcgctaggcaacctcaccgacacactcatcgtcaacatggaatgt
gtaggggaggttttccaggaggaactgtctgacatgttggtcctccagatgctacagtcg
gccaccaaggcttctattgacaaggacagggtgaagagtaatgcggtgcgtgcgttgggg
aacctgctccacttcctgtctgtcagtcagctgacccggccggggttccagcgccccctg
gaggaggcggtcagcgcactggtcaccacggtccaatcagaagccatgatgaaggtccgc
tggaatgcctgctatgccctgggcaacgccttcaggaaccctgccctgcccctcgattct
gcttcctggtccggcgatgcgttttccgccctctgctgtgttgtcacttcctgtcagaac
ttcaaggtgcgcatcaagtctgctgctgccctctccgtccccgcctgccgtcattgctac
ggtgatgcggagcggttcgggcgtgtttggcgctcactggccgcggcgttggaacacagc
gaggagacgcaggacttcctggagtaccgctactgctcctctctccgacacacactcaca
cacgccctcacacacctgctacgactcagccaatcacaggacatgcctgccctgggggtg
tcgctcgtcatggagaaggggaggggcttcaaggaacacctggtgaaatacctgagaggg
ggaggagggacggag
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