Coregonus clupeaformis (lake whitefish): 121536439
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Entry
121536439 CDS
T08357
Name
(RefSeq) integrator complex subunit 6-B-like isoform X1
KO
K13143
integrator complex subunit 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121536439
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
121536439
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Gene cluster
GFIT
Motif
Pfam:
INT_SG_DDX_CT_C
VWA_2
Motif
Other DBs
NCBI-GeneID:
121536439
NCBI-ProteinID:
XP_041699632
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All DBs
Position
23:complement(55980180..56023402)
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AA seq
935 aa
AA seq
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MPVLLFLIDTSASMNQRTHLGTTYLDIAKGAVETFMKLRGRDPASRGDRYMLINLEDVPL
GIKAGWKESHATFMMELRNLQAAGLTTIGQSLRTAFDLLNLNRLVSGIDNYGQGRNPFFL
EPSIVVAITDGNKLTSSGGVQDELHLPLTTPLPGSELTKEPFRWDQRLFSLVLRIPGHAT
VEPEPLGGVPPDDSAITPMCEVTGGRSYSVFSQRMLNQCLESLLQKIQSGVVISFEKTGP
DPSSGEDEILKSGPQSWHCCRKLIYVRPNPKTGVPIGHWPIPEAFWPDTNSPTLPPRSVH
PHVRFSCLDAEPMVIDKVPFDKYELEPSPLTQYILERKAPHTCWQVFVSNSAKYSDLGQP
FGYLKASTALNCVNLFVMPYNYPVVLPLLDDLIRVHKFKPSMKWRQSFENYLKTMPPYYI
GSLRKALRIMGAPNLLADNIEYGLSYSVVSYLKKLSQQTKIEYERLIASVAKKVVAEGGI
TVRARGGDISLAQRRDFTQLLASITGETPALPLDLNPKDFSGFQLAPLNKSLKPQGFRNA
YDIPRMHLLDQLSRMRRNLLGTSCLLRGQDPDQLHSVPIAQMGNYQDFLKALPQPLRDAD
PEQPKRLHTFGNPFKLDKKGMMIDEADEFVTGPQNKGKRPGGDSNLHGVGVGGPKRRRCM
SPLLRPGRTYTPPVSPAASPSRTPLTERENSGNLYSPEVRETGTGPRPGEILSGPPLGGP
GPGNHTGNLYSPEVRETGTGPRPGEILSGPPLGGPGPGNHTGNLYSPEVRETGTAAQPRQ
GEILSGPPLDGPGPGNHTEDDGDGDTEEESRHPWEAELSEGSEDEGETRGVEEERLPRYP
SPGELKKVMNSEILEVNTVLRNLINKEIRKPGRHYEKIFLFLKQIQGSFDTRLIFLRNII
KEATRFKKRVLIEQLENFLEEIHNRAKNMNHQDGF
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgttactttttctgatagacacgtccgcgtcaatgaaccagcgcacccacctg
ggcactacctatctggacatagcgaaaggcgctgttgagactttcatgaagctcagaggc
agagatcctgctagccgaggggacaggtatatgttgataaatcttgaagatgttcccctc
ggaataaaggctggatggaaagagagccatgccacattcatgatggagctgaggaacctt
caagcagcaggactcacaactattggccagtctttgaggaccgcttttgatttgctcaat
ctcaatagattagtgtctgggatagacaactatggacagggcaggaatcccttcttcctt
gagccgtccattgtagtggccatcaccgacggcaacaagctgaccagtagcggtggagtc
caggatgagctccaccttcccctgaccactcctctgccgggcagtgagctgaccaaggag
ccgttccgctgggaccagcgtctgttctccctggtgctgaggatccctggacacgccact
gtagagcctgaaccactagggggggtcccccccgacgactcggccatcacccccatgtgt
gaggtcacaggaggccgctcctacagtgtgttctctcagcgcatgttgaaccagtgtctg
gaatctctgctgcagaagatccagagtggagtcgtcatcagctttgagaagacaggccct
gacccctcttctggagaggatgagatcctgaagtccggcccccagtcctggcactgctgc
cgcaagctgatctacgtacgacccaaccccaagactggtgtgcccatcggacactggccc
attcctgaagccttctggcccgacactaactcccccaccctgcccccccgctcggtacac
ccccacgtgcgcttctcctgcctggatgctgagcccatggtgatagacaaggttcccttt
gacaagtacgagctggagccttcgcccctcacacaatacatcctggagaggaaggcccct
cacacctgctggcaggtatttgtaagtaacagtgccaagtacagtgacctgggccagccc
tttggctacctgaaggccagcacagctctcaactgtgtcaacctgtttgtcatgccctac
aactaccctgttgtactgcctctactggatgatttgatccgggtgcacaagttcaagccc
tccatgaaatggcgtcagtcgtttgagaactacctgaagaccatgcctccctactacatt
gggtccctccggaaggccctaaggatcatgggagctcccaacctcctggccgataacata
gagtatggtctgagttacagtgtagtgtcctaccttaagaagctcagccagcagaccaag
atcgaatacgagcggctgatagcgtctgttgctaagaaggtggtagcggagggtggcatc
acggtgcgtgcccgcggtggggacatctccctggcccagcgcagagacttcacccagctt
ctggccagcatcacaggagagacgcccgcccttcccctcgacctcaaccctaaagacttc
tctggctttcagctggcgccgctcaacaagagtctgaaacctcagggtttccggaatgcc
tatgacattcccagaatgcacctgctggatcagctgagccgcatgaggaggaacctgctc
ggcaccagctgtctgctccgtggacaggacccagaccagctccacagtgtccccatcgcc
cagatggggaactaccaggacttcctaaaggcccttccccaacccctcagagacgcagac
cctgagcaacccaaacgcctgcacaccttcggaaaccccttcaaactggacaagaagggg
atgatgattgacgaggcggatgagtttgtgacgggtccccagaacaagggcaagcgcccg
gggggtgactccaacctgcacggggtcggggtcgggggtcctaagagacggaggtgcatg
tcccccctactgcgccccggcaggacctatacaccccccgtcagccctgcagccagcccc
tccagaaccccactcactgagagggagaacagtgggaacctctacagcccagaggtgaga
gagaccgggacaggaccgagaccaggagagatcctctctggaccccctctaggcggcccc
ggaccagggaaccacacggggaacctctacagcccagaggtgagagagaccgggacagga
ccgagaccaggagagatcctctctggaccccctctaggcggccccggaccagggaaccac
acggggaacctctacagcccagaggtgagagagaccgggacagcagcccagccgagacag
ggagagatcctctctggaccccctctagacggccccggaccagggaaccacacggaggat
gatggtgatggggacacggaggaggagagcaggcatccctgggaggcggagctctcggag
ggcagtgaggacgaaggagagacgaggggtgtggaggaggagcgtctgccccggtacccc
tcccccggggagctgaagaaggtgatgaacagcgagattctggaggtcaacaccgtgcta
cggaacctcatcaacaaggagatacggaaaccagggagacactatgaaaaaatcttcctt
ttcctgaagcagatccaaggaagctttgacacacggttgatattcctccggaacattata
aaagaggccacaaggttcaagaagcgggtgttgatagaacagctggagaactttctagaa
gagatccacaacagggccaaaaatatgaaccaccaggacgggttctaa
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