Coregonus clupeaformis (lake whitefish): 121536440
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Entry
121536440 CDS
T08357
Name
(RefSeq) nucleoporin NUP35-like isoform X1
KO
K14313
nuclear pore complex protein Nup53
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121536440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121536440
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121536440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
121536440
NCBI-ProteinID:
XP_041699633
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All DBs
Position
23:56021042..56041132
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AA seq
309 aa
AA seq
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MEFQGTELMTLGSPTSPKPGPGAQFLPGFLMGDLPAPVTPQPRSFGVMDMRSPLQTGGST
PQPVVPTPKDKSGAPPVRSIYDDLSSPAVGMSPMGAHKQPFSMMHTPLSGYMAVTPGTAS
SIFSPATIGQQAKSTMSPAQVDPFFTQGDALSSEDRLDDTWITVFGFPPAAASYILLQFA
QYGNIMKHVMSNTGNWMHIQYQSKLQARKALSKDGKIFGEAIMIGVKPCIDKNVMESSDR
GATFSGSVFTPPVRNGTPGHHVSTPRPSMRPLSAAYKASSSDYQVVADGQTPRKDDSLVS
KAMEYMFGW
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaattccaaggcacggaactaatgactctgggttccccaacatcacccaagcccggc
ccgggtgcccagtttctccccggatttttgatgggggatctgccggcacctgtcacaccc
cagcctcggtcatttggggtcatggatatgaggtcaccacttcaaacaggtggctctacc
cctcaacccgtggttcctacacccaaagacaagagtggggcccctccggtcaggagtatc
tacgatgacctctccagtcctgctgtagggatgtcccctatgggcgcacataaacagccc
ttctcaatgatgcacaccccactgtctggttatatggcagttacaccaggaacagcatcc
agtatatttagtcctgctaccatcggacagcaggcgaagtcaacaatgtctccagcccaa
gtagaccctttcttcactcagggagatgcactgtcttccgaagaccgtctagatgatact
tggatcactgtgtttgggttccctcctgccgccgcatcttatattctgttgcagtttgcc
cagtatggaaacataatgaaacacgtgatgtccaacactggtaactggatgcacattcaa
tatcagtctaaactccaagcaagaaaagcactaagtaaagatgggaagatttttggcgag
gctataatgattggtgttaaaccatgcattgataagaatgtgatggagagctcagaccga
ggtgctaccttctccggctcagtatttactcctccagtcagaaacggaaccccaggccac
catgtctctacaccacgcccctctatgaggcccctcagtgcagcctacaaggcctccagc
agtgactaccaggtggtggcagacggacagaccccaaggaaagatgatagtttggtttcc
aaagcgatggagtacatgtttggctggtga
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