Coregonus clupeaformis (lake whitefish): 121536445
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Entry
121536445 CDS
T08357
Name
(RefSeq) desmin isoform X1
KO
K07610
desmin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121536445
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121536445
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
121536445
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF7491
DUF4200
DUF1664
Mis14
TolA_bind_tri
Baculo_PEP_C
KASH_CCD
CENP-F_leu_zip
DUF1192
CCDC92
Motif
Other DBs
NCBI-GeneID:
121536445
NCBI-ProteinID:
XP_041699642
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Position
23:complement(50147081..50168722)
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AA seq
511 aa
AA seq
DB search
MSKSFSSQSAQSASSYRRTFGSGVGSTPGMSSMFSHGGRGSSGSAHMSSRVYEMTKTSAR
PSYSSGSIRSSSGGAMRSYSGMGEKLDFNLADATNRDFLDTRTNEKAELQHLNDRFASYI
ENVRFLEQQNATLVVEIERLRGREPTRVAEMYEEEMRELRRQVDGMSNDRARMEVERDNL
ADDLQKLKLRLHEEIHQKEEAESNLSAFRADVDSATLSRLDLERRIESLQEEIAFLKKIH
EEEIHELTSQMQETSVQVQMDMTKPDLTAALRDIRMQYEGIAAKNISEAEDWYKSKVSDL
NQAVNKNNDALRQAKQESMEFRHQIQSYTCEIDSLKGTNESLLRQMREMEDRLGNEAGGY
QDSITRLESEIAKMKDEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRITVSGSQS
SHSGSHSAAHSAASSYSTIGFRETSPDAGRSSEVHSKKTVLIKTIETRDGEESPIETMSL
LEESPVSQKKKKSSRKNKVVSESTQHQQDIM
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtccttctcctcccagtccgcccagtcagcctcttcctaccgccggaccttc
ggctccggtgttggatccaccccaggcatgtcctccatgttctcccacggtgggcgcggc
tcctccggctctgcccacatgtcctccagagtgtacgagatgaccaagacctccgctcgc
cccagctactcctccggcagcatccgttcctcctccggcggcgcaatgcgctcgtactcc
gggatgggcgagaagctggacttcaacttggctgacgccacgaaccgcgacttcctggac
accaggaccaatgagaaggcagagctgcagcacctgaatgaccggttcgccagctacatc
gagaatgtccgtttcctggagcagcagaacgctactctggtggtggagattgagaggctg
aggggccgcgagccgacccgcgtggccgagatgtacgaagaggagatgagagagctgagg
cgtcaggtggatggcatgtccaatgacagagcccgcatggaggtggagagagacaacctg
gctgacgacctacagaaactcaaactcagactgcatgaggagatccaccagaaggaagag
gcagagagcaacctgtctgcattcagagctgatgtggactctgccactctgtccaggctg
gacctggagagacgcatcgagagcctgcaggaggagatcgccttcctcaagaagattcat
gaggaggagatccatgagctgaccagccagatgcaggagacctcagtacaggtccagatg
gacatgaccaaaccggacctgaccgctgccctcagggacatccgcatgcagtacgagggc
atcgccgccaagaacatctcagaggcagaggactggtacaagtccaaggtgtcagacctg
aaccaggctgtgaacaagaacaacgatgctctgagacaggccaaacaggagagcatggag
ttcagacaccagatccagtcctacacctgcgagatcgactctctcaagggaaccaacgag
tctctgctgaggcagatgagggagatggaggatcgtctgggaaacgaggctggaggttat
caggactccatcacccgtctggagtctgagatcgccaagatgaaggatgagatggctcgc
cacctcagagagtaccaggacctgctcaacgtcaagatggccctggacatagagatcgct
acctacaggaaactactggagggagaggagagcagaatcactgtttctggctcccagtct
tctcactctggctcccactcggctgctcactcggctgcctcatcatattccactattgga
ttcagagagaccagcccagacgccgggcgttcatcagaggtccactccaagaagactgtt
ctgatcaagaccatcgagacccgcgatggagaggaaagtcccattgagaccatgtctctt
ttggaagagagccctgtttcacaaaaaaaaaaaaaaagcagcagaaaaaacaaggtggtc
agtgaatctacacagcaccagcaggacatcatgtaa
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