KEGG   Coregonus clupeaformis (lake whitefish): 121536445
Entry
121536445         CDS       T08357                                 
Name
(RefSeq) desmin isoform X1
  KO
K07610  desmin
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04519  Cadherin signaling
cclu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    121536445
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121536445
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cclu04812]
    121536445
Cytoskeleton proteins [BR:cclu04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     121536445
SSDB
Motif
Pfam: Filament Filament_head ZK652 DUF8429 PMD1-like DUF7491 COLEC12 CCDC39 CCDC89 DUF4200 DUF1664 Mis14 Baculo_PEP_C KASH_CCD CENP-F_leu_zip SPC25_N DUF1192 Mua CCDC92 DUF4140
Other DBs
NCBI-GeneID: 121536445
NCBI-ProteinID: XP_041699642
LinkDB
Position
23:complement(50147081..50168722)
AA seq 511 aa
MSKSFSSQSAQSASSYRRTFGSGVGSTPGMSSMFSHGGRGSSGSAHMSSRVYEMTKTSAR
PSYSSGSIRSSSGGAMRSYSGMGEKLDFNLADATNRDFLDTRTNEKAELQHLNDRFASYI
ENVRFLEQQNATLVVEIERLRGREPTRVAEMYEEEMRELRRQVDGMSNDRARMEVERDNL
ADDLQKLKLRLHEEIHQKEEAESNLSAFRADVDSATLSRLDLERRIESLQEEIAFLKKIH
EEEIHELTSQMQETSVQVQMDMTKPDLTAALRDIRMQYEGIAAKNISEAEDWYKSKVSDL
NQAVNKNNDALRQAKQESMEFRHQIQSYTCEIDSLKGTNESLLRQMREMEDRLGNEAGGY
QDSITRLESEIAKMKDEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRITVSGSQS
SHSGSHSAAHSAASSYSTIGFRETSPDAGRSSEVHSKKTVLIKTIETRDGEESPIETMSL
LEESPVSQKKKKSSRKNKVVSESTQHQQDIM
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgagcaagtccttctcctcccagtccgcccagtcagcctcttcctaccgccggaccttc
ggctccggtgttggatccaccccaggcatgtcctccatgttctcccacggtgggcgcggc
tcctccggctctgcccacatgtcctccagagtgtacgagatgaccaagacctccgctcgc
cccagctactcctccggcagcatccgttcctcctccggcggcgcaatgcgctcgtactcc
gggatgggcgagaagctggacttcaacttggctgacgccacgaaccgcgacttcctggac
accaggaccaatgagaaggcagagctgcagcacctgaatgaccggttcgccagctacatc
gagaatgtccgtttcctggagcagcagaacgctactctggtggtggagattgagaggctg
aggggccgcgagccgacccgcgtggccgagatgtacgaagaggagatgagagagctgagg
cgtcaggtggatggcatgtccaatgacagagcccgcatggaggtggagagagacaacctg
gctgacgacctacagaaactcaaactcagactgcatgaggagatccaccagaaggaagag
gcagagagcaacctgtctgcattcagagctgatgtggactctgccactctgtccaggctg
gacctggagagacgcatcgagagcctgcaggaggagatcgccttcctcaagaagattcat
gaggaggagatccatgagctgaccagccagatgcaggagacctcagtacaggtccagatg
gacatgaccaaaccggacctgaccgctgccctcagggacatccgcatgcagtacgagggc
atcgccgccaagaacatctcagaggcagaggactggtacaagtccaaggtgtcagacctg
aaccaggctgtgaacaagaacaacgatgctctgagacaggccaaacaggagagcatggag
ttcagacaccagatccagtcctacacctgcgagatcgactctctcaagggaaccaacgag
tctctgctgaggcagatgagggagatggaggatcgtctgggaaacgaggctggaggttat
caggactccatcacccgtctggagtctgagatcgccaagatgaaggatgagatggctcgc
cacctcagagagtaccaggacctgctcaacgtcaagatggccctggacatagagatcgct
acctacaggaaactactggagggagaggagagcagaatcactgtttctggctcccagtct
tctcactctggctcccactcggctgctcactcggctgcctcatcatattccactattgga
ttcagagagaccagcccagacgccgggcgttcatcagaggtccactccaagaagactgtt
ctgatcaagaccatcgagacccgcgatggagaggaaagtcccattgagaccatgtctctt
ttggaagagagccctgtttcacaaaaaaaaaaaaaaagcagcagaaaaaacaaggtggtc
agtgaatctacacagcaccagcaggacatcatgtaa

DBGET integrated database retrieval system