Coregonus clupeaformis (lake whitefish): 121536445
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Entry
121536445 CDS
T08357
Name
(RefSeq) desmin isoform X1
KO
K07610
desmin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04519
Cadherin signaling
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
121536445
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121536445
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121536445
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
121536445
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
ZK652
DUF8429
PMD1-like
DUF7491
COLEC12
CCDC39
CCDC89
DUF4200
DUF1664
Mis14
Baculo_PEP_C
KASH_CCD
CENP-F_leu_zip
SPC25_N
DUF1192
Mua
CCDC92
DUF4140
Motif
Other DBs
NCBI-GeneID:
121536445
NCBI-ProteinID:
XP_041699642
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All DBs
Position
23:complement(50147081..50168722)
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AA seq
511 aa
AA seq
DB search
MSKSFSSQSAQSASSYRRTFGSGVGSTPGMSSMFSHGGRGSSGSAHMSSRVYEMTKTSAR
PSYSSGSIRSSSGGAMRSYSGMGEKLDFNLADATNRDFLDTRTNEKAELQHLNDRFASYI
ENVRFLEQQNATLVVEIERLRGREPTRVAEMYEEEMRELRRQVDGMSNDRARMEVERDNL
ADDLQKLKLRLHEEIHQKEEAESNLSAFRADVDSATLSRLDLERRIESLQEEIAFLKKIH
EEEIHELTSQMQETSVQVQMDMTKPDLTAALRDIRMQYEGIAAKNISEAEDWYKSKVSDL
NQAVNKNNDALRQAKQESMEFRHQIQSYTCEIDSLKGTNESLLRQMREMEDRLGNEAGGY
QDSITRLESEIAKMKDEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRITVSGSQS
SHSGSHSAAHSAASSYSTIGFRETSPDAGRSSEVHSKKTVLIKTIETRDGEESPIETMSL
LEESPVSQKKKKSSRKNKVVSESTQHQQDIM
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtccttctcctcccagtccgcccagtcagcctcttcctaccgccggaccttc
ggctccggtgttggatccaccccaggcatgtcctccatgttctcccacggtgggcgcggc
tcctccggctctgcccacatgtcctccagagtgtacgagatgaccaagacctccgctcgc
cccagctactcctccggcagcatccgttcctcctccggcggcgcaatgcgctcgtactcc
gggatgggcgagaagctggacttcaacttggctgacgccacgaaccgcgacttcctggac
accaggaccaatgagaaggcagagctgcagcacctgaatgaccggttcgccagctacatc
gagaatgtccgtttcctggagcagcagaacgctactctggtggtggagattgagaggctg
aggggccgcgagccgacccgcgtggccgagatgtacgaagaggagatgagagagctgagg
cgtcaggtggatggcatgtccaatgacagagcccgcatggaggtggagagagacaacctg
gctgacgacctacagaaactcaaactcagactgcatgaggagatccaccagaaggaagag
gcagagagcaacctgtctgcattcagagctgatgtggactctgccactctgtccaggctg
gacctggagagacgcatcgagagcctgcaggaggagatcgccttcctcaagaagattcat
gaggaggagatccatgagctgaccagccagatgcaggagacctcagtacaggtccagatg
gacatgaccaaaccggacctgaccgctgccctcagggacatccgcatgcagtacgagggc
atcgccgccaagaacatctcagaggcagaggactggtacaagtccaaggtgtcagacctg
aaccaggctgtgaacaagaacaacgatgctctgagacaggccaaacaggagagcatggag
ttcagacaccagatccagtcctacacctgcgagatcgactctctcaagggaaccaacgag
tctctgctgaggcagatgagggagatggaggatcgtctgggaaacgaggctggaggttat
caggactccatcacccgtctggagtctgagatcgccaagatgaaggatgagatggctcgc
cacctcagagagtaccaggacctgctcaacgtcaagatggccctggacatagagatcgct
acctacaggaaactactggagggagaggagagcagaatcactgtttctggctcccagtct
tctcactctggctcccactcggctgctcactcggctgcctcatcatattccactattgga
ttcagagagaccagcccagacgccgggcgttcatcagaggtccactccaagaagactgtt
ctgatcaagaccatcgagacccgcgatggagaggaaagtcccattgagaccatgtctctt
ttggaagagagccctgtttcacaaaaaaaaaaaaaaagcagcagaaaaaacaaggtggtc
agtgaatctacacagcaccagcaggacatcatgtaa
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