Coregonus clupeaformis (lake whitefish): 121536449
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Entry
121536449 CDS
T08357
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B isoform X1
KO
K14849
ribosomal RNA-processing protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121536449
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclu03009
]
121536449
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121536449
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
121536449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
121536449
NCBI-ProteinID:
XP_041699646
LinkDB
All DBs
Position
23:394592..400612
Genome browser
AA seq
1011 aa
AA seq
DB search
MSGNMAPIQQEPEIQFAQRLASNEKPMRTKAIKKLRKYISVRSQKIKGGFESDELLKLWK
GLFYCLWMQDKPLLQEELSNQISGLMHNFQNIQSQFLFLETFLQTIKREWTGIDRLRMDK
FFQLVRFVFKNTFEMMKRKEWETSVVTRFLELLNAQVLHSSSGSPCGLQFHILDIYMTEL
AAVGSAELTAAQNLTFIDPFCKTASKTKDRILLRAICSSIFSAIVDQAPFAIEDLLKEVK
ATGGGAEESDSGQASEEEEEDEEPPKGKKAVKKSPKKTTGGQTNGTVSTEEDDEDGLEDE
EDDEMLHMESDSESEMPDDAGIGPVLQFDYSALADRLFGLASRSNTPSHNRQRLYKVIKT
LRDLSEGVFPQDEYPEEVSTDEDDDEMFGSRKRMKRGRGFGEEEEESSPAKKRKGKKGDS
KAGKSDQTAATDDSKPAETPGDANNKKKKRKKKTGEVKSDEQNGVGSEADTTPASAPQTT
DAKEAETEPSVHAKGTDTGAAVLEKAAMETGVQSGTPHDVVVGNLSSVTVTEVDQKKRSE
TTVSDATSSKKKNKIKKSKTPAPEEKEEVAKSETNTDVMGPSVDTTEAGGQPAPVTQDGE
AAEGSTEPEPAPETATTSTSRRKRRRKSTKQESDEQTTIEEVEMTSETVDETTATPPKTT
TRRRRKAKRTTEVAVTDATLVETTPAEPEADSTPAEEPPADLRIAATPLKKKKKKQKVAE
EESVEMQPETEADVIPVDAEVAPAYVATPTPLKKKKKAAKAEEQSMEVKGETQPKADANL
ALIEAEVESVEVATPTPLKKKRSGRVAEEQETESVAEEQPTDADLNTPGKKKKKRKIPLV
IEVEAEVNGVAGGKKGKLSNDSEEPSTPVSAKKTKKMTPKKAKAGVESDFITFQNHASIP
TPLFYKTAKGSPSTPLSSKKKKKCQTPKSESKKVTFGLNKNKTAGSPEFRKTDRSLLVSP
EGSSRVPFDPQQKPLFGVLKSPEASLTNSTKKKTKSTPKTTPKRPTAADFF
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaaacatggcgccgatacagcaagaaccagagatccagttcgcgcaaagattg
gcttctaatgagaagcccatgcgaacaaaggccatcaagaagctaagaaaatatatcagt
gttaggtcacagaaaattaaaggggggtttgaaagcgacgagttactcaaactatggaaa
ggcctcttttattgcctgtggatgcaggacaagccacttcttcaggaggagctgtcgaat
cagatctctggcctgatgcacaacttccagaacattcagagccagtttttgtttctggag
accttcctgcagaccatcaaaagagaatggaccggcattgacaggcttcgcatggataag
ttcttccagctggttcgtttcgtgttcaagaacacttttgaaatgatgaaaaggaaagaa
tgggagaccagtgtggtgaccaggtttctggagctcctgaatgcccaggtcctccacagc
tccagcggatccccctgtggtttgcagtttcacatactggacatctatatgactgagctg
gctgcagtcggttcagctgagctcacggcggctcagaacctgacattcattgaccctttc
tgcaaaacagcatccaaaacgaaagatcggatcctgctcagggctatctgcagcagcatt
ttcagtgccatcgtagaccaggctcctttcgccatcgaagacctgttgaaggaagtgaag
gctacaggtggaggggctgaggagtccgactcagggcaggcttctgaagaagaggaggag
gatgaggagccccccaagggcaaaaaagctgtaaagaaatctcccaagaaaaccactggt
gggcagaccaacggcactgtatcaactgaggaagatgatgaagatggtctggaggatgaa
gaggatgatgaaatgcttcatatggagagtgactctgagtccgagatgccagatgacgca
gggatcggacctgttctccagtttgactactctgcactggcggacaggctgtttgggcta
gccagccgcagcaacacccccagccacaacaggcagagactgtacaaagtcatcaagact
ctccgggatctcagtgaaggagtcttcccacaggatgagtacccagaggaggtgtcgaca
gatgaggatgatgatgaaatgtttggcagtagaaagagaatgaaacggggacgaggcttc
ggggaggaggaagaagagagctcaccagccaagaaacggaaaggcaagaaaggggactcc
aaagcaggaaagtctgaccagactgccgcaacagatgacagtaaaccagcagagactccc
ggagacgccaacaacaagaagaagaagaggaagaagaagactggagaggtgaagagtgac
gagcagaacggggtggggtcagaggcggacacgactcctgcttcagcgccacagacgaca
gacgctaaagaagcggagacggagccctctgtccacgccaagggcaccgacactggagcg
gctgtcctggagaaggcagccatggagacgggggtccaatcaggaactccacatgatgtg
gtggtgggtaacctatcctcggtcacggtcacggaggtagaccagaagaagagatcagag
acgacagtatcagacgccacgtcttccaagaagaaaaataagatcaagaagtccaaaacg
cctgcaccagaggagaaggaagaggtagcaaaatcagagactaacacagatgtgatgggg
cctagtgtggacaccacggaggcaggaggccagcctgctcctgttacccaggacggggag
gcagcagaggggtcaacagagccagagcctgcccctgagactgctactacctccacgagc
aggaggaagagaaggaggaaaagcaccaagcaggagtctgacgagcagacaaccatagag
gaagttgaaatgacgtcagaaacagtagacgagaccacggccaccccaccgaagacgacg
acgaggaggaggaggaaggctaaacggaccactgaggtagctgtaacagatgcaacactg
gtagagacaacacctgcggaacctgaagccgactctacaccagccgaggagcctccagct
gacctccgcatcgctgccactcccctgaagaagaagaagaagaaacaaaaggtggctgag
gaggagagcgttgaaatgcagccagaaactgaagcagacgtcatacctgtagacgctgag
gtggcgccagcgtacgtcgctacaccaaccccgctcaagaagaagaagaaagcggccaag
gctgaagaacagagcatggaggtcaagggtgaaacccagccgaaagcagatgcaaacctt
gcactgatagaagctgaggtagagtcggtggaggtcgccacacctaccccactcaagaag
aagaggtctggacgggtagcagaggagcaggagacggagagcgttgcagaggagcagccc
acagatgctgacctgaacactcccgggaagaagaagaagaagaggaagatcccgttagtg
atagaggtcgaggctgaggtcaacggggtggctggaggcaagaaaggaaaactgagcaac
gacagcgaagagccgtccacaccggtgagcgccaagaaaaccaaaaaaatgacgcccaag
aaggctaaggcaggggtggagtctgacttcatcacgttccagaaccacgcctccatccct
acaccccttttctacaagacagccaagggaagccccagtacaccgctatccagcaagaag
aagaagaagtgtcagactccaaagtccgaatccaagaaggtcaccttcggactcaataaa
aacaaaactgcaggatccccagagttcaggaagactgatcgcagcctgctggtgagtcca
gaggggtcgtcccgagtgccctttgacccccagcagaagcccctgtttggggtcttgaag
tccccggaggcctctcttaccaacagcactaagaagaagaccaagagcacccccaaaacc
acccccaaacgccccaccgcggctgatttcttctag
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