Coregonus clupeaformis (lake whitefish): 121536455
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Entry
121536455 CDS
T08357
Name
(RefSeq) homeobox protein PKNOX1 isoform X1
KO
K24891
homeobox protein PKNOX
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121536455
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121536455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Meis_PKNOX_N
Homeobox_KN
Homeodomain
DUF7645
Motif
Other DBs
NCBI-GeneID:
121536455
NCBI-ProteinID:
XP_041699657
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Position
23:complement(248179..262490)
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AA seq
465 aa
AA seq
DB search
MCFSRSANMMAAQSVSIDQYLEGEQQVGQKSEATRMGMQGEEQADVDSNPEQAFSEEGLA
AASSPALTEPQTPMDVDKASIYRHPLFPLLALLFEKCEQSTQGSDCVTSASFDVDIENFV
RSQEKEGKAFFSEDPDLDNLMVKAIQVLRIHLLELEKVSDLCKDFCSRYIACLKTKMNSE
TLLSGEPGSPYSSGQGFSPTKTQTSNSFTGTLSPQGIVVPASALQQGNVTVTTVNPTQVM
AGMSPWHTTTTGGTVYQPVTVINSQGQVVSQTLSPQTIRIQNTQLQLQLNQDLSFFNQDD
SSPKNKRGVLPKHATNIMRSWLFQHIGHPYPTEDEKKQIATQTNLSLLQVNNWFINARRR
ILQPMLDASSSETPKTKKKPPQNRPLQRFWPDSIATGMTQQQVQMPDGTMVMMSMEGLQS
LTSDGATLAVQQVMIGGHSEDESGDSGDEDDDMAGLGLDNSDSLQ
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttttctaggtccgccaacatgatggctgcccagtcggtttccatagaccagtac
ctggagggagagcagcaggtgggtcagaagtctgaggccacaaggatgggtatgcagggg
gaggagcaggcggacgttgattctaatccggagcaggcgttcagtgaggagggtttggct
gcagcatccagtccagccctcactgagccccagacccccatggatgtagataaggcttcc
atataccggcatcccttgttccctctcctggccctgctctttgagaaatgtgagcagtct
acacagggctccgactgtgtcacgtcagccagcttcgacgtggacatcgagaactttgtc
cgcagccaggagaaagagggcaaagccttcttcagcgaggaccctgatctcgacaatctg
atggtgaaggccatccaggtgctgcggatccacctgctggagctggagaaggtcagcgac
ctgtgtaaggacttctgcagccgctacatcgcctgccttaagaccaagatgaacagcgag
acgctgctgagtggagaacctggcagcccctactcatctggacagggcttctctcccacc
aagacccagacatccaactctttcacaggaaccctcagtccccaggggattgtggtgcca
gcatcggccctgcagcaaggcaacgtaaccgtgacaacagtcaaccccacacaggttatg
gcaggtatgtcaccctggcatacaacaaccacaggtggcacagtctaccaaccagtcaca
gtaatcaactcacagggccaggtggtgtcacagaccctctccccccagaccatacgcatc
cagaacacacagctccagctgcagctcaaccaggacctgagcttcttcaaccaggacgac
agctcacccaagaacaagcgtggcgtccttcccaaacatgccacaaacataatgcgctcc
tggctcttccagcacatcgggcacccctaccccacggaggatgaaaagaagcagatcgct
acccaaactaacctcagcctcctccaggtcaacaactggttcataaacgcgcggcggcgg
atcctccagcccatgctggacgccagctcctcagagacacccaaaaccaagaagaaaccg
cctcagaaccggccgctgcagcgcttctggcctgactccatcgccacggggatgacccaa
caacaggtccagatgccagatggaaccatggtgatgatgagtatggagggtctccagagc
ctgacatcagacggggccacgctggccgttcagcaggtgatgatcggcgggcacagcgag
gacgaatcaggagacagcggggacgaggacgacgacatggctgggctgggcctggacaac
agcgactccctgcagtag
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integrated database retrieval system
