KEGG   Coregonus clupeaformis (lake whitefish): 121536459
Entry
121536459         CDS       T08357                                 
Name
(RefSeq) protocadherin-8-like isoform X1
  KO
K16499  protocadherin delta 2
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cclu04515]
    121536459
Cell adhesion molecules [BR:cclu04515]
 Cadherins
  Protocadherins
   121536459
Motif
Pfam: Cadherin Cadherin_2 Cadherin_3
Other DBs
NCBI-GeneID: 121536459
NCBI-ProteinID: XP_041699678
LinkDB
Position
23:55946..60866
AA seq 969 aa
MGFCRIRGVGECVVLAVLFYSVQSTTTRYYTYEEDAPGTEIGNLSQDLKIDPAEDTQTSF
RFMQETNSCVIQMRETDGLLTVGETIDREQLCPRSPRCFVTFDIVAFSKEKFQLIHVEIE
VRDINDNSPQFLHNETTLEISENVQVDSRFPLDIAVDHDVGNNYIQSYHISPSSHFIVDV
RSREDGVKYAELVLVKAMDREAEDSYTIEVTATDGGEPPRSGSMTVHIKVLDFNDNSPTF
EHNSLKVELYEDSPVGYQVLKVHAFDPDAGINGEVVYGFVEDTSSEAMRIFNIDRISGAV
TLNTLVDYEKKRSHELNIKASDLGTNSIPSTCKVVVDVVDVNDNAPEITIKPKTSTSDDV
AYITEAAAEESFVALISTSDSDSGSNGYVRSSLHGHDHFKLQQAYGDTFMIVTTTTLDRE
KIPEYNLTVMAEDLGTPPFKTVKQYTIRVTDENDNAPLFSKSIYEVSVLENNIPGSYITT
VVARDLDRGKNAKVSYKLIDSEVVGDASISTYVSLDPVSGSLYSLRSFDFETLQQIELTI
QAEDKGSPQLSSTSVIRIKVVDQNDNYPYFTFPVMLNDSVEIPLPVNAPVGYLALRVKGQ
DEDEGMNGELSYRIVQGDSKIFSINKDTGEIAVKQGLASAIGDVLEIKIALSDNGRSPLS
SRATIRFVVTDLQLSDDQLVIVLQSSDEESTGLDVSVVVIIILGGGCTLLLIAIAIVVIT
CKLNRGGKDHDSKRDVTHSLFGSRRHPRLNSAEPNIYGGPRGFLSERTPSSLDESSLYEE
KSGGLESQMFLPPKPFQPSSVWQGDKYCPQMSSGIDQQSVKDSGKGDSDFNDSDSDISGD
GGKRNLRTFQPWAKSSFHAANTLAVDCQGTYCVIPTQSFQAPRDNAYTIGFTQAPVYNNP
HAYRHSWKDSSYNTSVPKARNTMQTFCHPTSTLLSYFTKTQSPGGLDEIQEHKQDITTVA
TISEVATIF
NT seq 2910 nt   +upstreamnt  +downstreamnt
atgggattctgcaggattcgaggagttggtgagtgcgtggtgcttgctgttctgttttac
tcggttcagtctacgaccacgaggtactacacgtatgaagaggatgcgcccgggacagag
attggaaatctgtctcaggatttaaagatagacccagctgaggacactcaaacatctttc
cgattcatgcaggagaccaattcgtgtgtgattcaaatgagggagactgatggactttta
actgttggggaaacgattgaccgggagcagctgtgcccgaggtccccgcggtgttttgtc
accttcgacatagttgccttctccaaagaaaagtttcagctgattcacgtagagatcgag
gtaagggacattaacgacaattcacctcagtttctccacaacgagacgacccttgagata
tccgagaatgttcaggtggactcccgattcccgttggacatcgctgttgaccatgatgtc
ggcaataactacatccaaagttaccatatctctccctccagccatttcatagtggatgtg
cgcagcagggaggatggagtgaagtatgctgaacttgtgcttgtgaaagcaatggacaga
gaggctgaagattcctatacaattgaagtgacggcaacagatggtggagagccccccagg
tccggatcaatgactgttcatatcaaagtgctggattttaatgacaacagcccaacgttt
gagcacaactcacttaaagttgaactttacgaggattctcctgtaggttaccaagtgctt
aaagtgcatgcgtttgacccagatgctggcatcaatggcgaggtagtgtatggatttgta
gaagacacatcatctgaagcaatgcgtatttttaatatagaccgaatttccggtgctgta
actttaaacacattggttgattacgagaagaagagatcccatgaactgaacattaaagca
tccgatttaggcactaattctattccatcgacttgcaaagtggttgttgatgtggtagat
gtaaatgataatgcaccagaaatcaccatcaagccaaaaacctcgacgagtgacgatgta
gcttacatcacggaggccgcagcggaggaaagctttgtggcgctgatcagcacctcggac
agcgactctggctcgaacggttatgtgcgcagcagcctacacggtcacgaccatttcaag
ttgcaacaggcctacggggacactttcatgattgtaacaaccaccactttagatagagaa
aagatcccggagtataacctcactgtaatggctgaagaccttggaactcctcctttcaaa
accgtcaagcagtataccatcagagtgaccgacgagaacgacaacgcccctctcttcagc
aaatccatttatgaagtttcagtcctggaaaataatatccccgggtcctatattactact
gttgtagcacgtgaccttgatcgcggtaaaaacgccaaagtgtcctataagctcatagac
tcagaggttgtcggggatgcttccatttcgacttatgtgtctttagacccagtgtcaggg
tcattgtatagcctaagatctttcgattttgaaacgctccagcagattgagttaaccatc
caggctgaggacaagggctcacctcagctgtcaagcacatccgtgatcagaatcaaagtg
gtggatcaaaacgacaactatccctattttaccttccccgttatgctgaatgactctgtt
gaaattccccttcctgtcaatgcaccagtggggtacctggccctacgggtcaaaggtcag
gatgaggatgagggtatgaatggtgagctcagctacagaatcgtacaaggtgactctaag
atattttcaatcaataaagacactggagaaatagctgtaaaacagggtctggcctctgct
attggagacgtgttggaaatcaagattgcattgagtgacaatgggagatcccctctctcc
agccgtgccaccattcgctttgttgtcacagacttacagctctcagacgaccaacttgtc
attgtattacagtcgagtgatgaggaaagcacaggcttggacgtttcagtagtagtaatc
attatactaggcgggggttgtactctgctgctgattgccatagcgattgttgtcatcaca
tgcaagctgaaccgaggagggaaggatcatgactccaagagagacgtgactcacagcctg
tttggctccaggcgtcatcccaggctcaactctgcagaacccaacatatatggtggtcca
agaggtttcctcagcgaaaggaccccttcatctcttgatgagtccagcctatatgaagag
aaaagtggcgggttggagtcccagatgttcctgcctcccaagcctttccaaccatcatct
gtgtggcaaggggacaaatactgcccgcaaatgagcagtggcattgaccagcagagcgtg
aaggacagtggaaaaggagacagtgacttcaatgacagtgactctgacatcagtggggat
ggaggcaagaggaacctccgcaccttccagccctgggccaaaagctcattccacgccgct
aacaccctcgctgttgattgccaaggcacttactgtgtaataccaacccaaagcttccag
gctcccagagacaatgcatacacaataggttttacccaagcgccggtctacaacaatcca
catgcctatcgccactcctggaaagactccagctacaacacaagtgttcccaaagcaaga
aacaccatgcagacattctgtcatcccacaagcaccctcctgtcttacttcacaaagaca
caatctcctggtggacttgatgaaattcaggagcacaaacaagatattactacagtggca
accatatctgaagttgctaccattttttaa

DBGET integrated database retrieval system