KEGG   Coregonus clupeaformis (lake whitefish): 121536460
Entry
121536460         CDS       T08357                                 
Name
(RefSeq) protocadherin-8
  KO
K16499  protocadherin delta 2
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cclu04515]
    121536460
Cell adhesion molecules [BR:cclu04515]
 Cadherins
  Protocadherins
   121536460
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_CELSR2_9th
Other DBs
NCBI-GeneID: 121536460
NCBI-ProteinID: XP_041699680
LinkDB
Position
23:47007357..47011377
AA seq 980 aa
MMRGILTGWHRSIFGFIILQMLFVSLAESEGNTLKYQTNEERSPGTVIGNLAMDMSLSRS
FSSKTNFRMMKQFNNYFIRVRESDGELTVGERIDRERICRHTLQCLITFDVVSFSKERYK
LIHVEVEVKDINDNYPEFPNKECTVEISENADVGFRIPLDPAEDADVGSNYIQSYQISVN
GHFSIDVLLRADGVKYAELVLMKELDRETQSSYVVELIATDGGNPFRSGSTKITIQVTDF
NDNRPVFDQNNFSVTLPEDAPVGFVLLDLNAVDPDEGLNGEVVYGFGKQVSAEIRELFEV
YSKSGRITLKNPVDFETKKTYELDVQATDLGANPIPAICKIIINVKDVNDNAPEISITPM
TSISTGIACISETAEKDSLVALISTSDGDSGVNSQVHCTLYGNDHFKLKQAYEDSYMIVT
AAALDREKISEYNLTVMAEDFGSPPLRKITEYTIRLSDENDNAPHFTKPVYEVSVVENNA
PGAYITTVEARDADLGTNGKITYRLLDSVIMGSPVNTFVSLNAISGSIYALRSFNYEVMK
HLEVHVQASDGGLPQLQSSAIINLKIMDQNDNSPSIVEPVLNKGSAKVFLPKHAPAGYVV
TRLKATDADEGINAQLSYSITGGGHLGFSINKVTGELHVSCELNYDLSETLRVVVAVNDN
GTPSLTSTATIHLALIEGTPPSVPAMVQSDSEEVFEWDMSIAIIIVLAGSCSLLLLGIIL
ITTTCSRRKREKREAAGCEKVDMPHVEKGDSSHIDSLITNHKSNAFDVHPFPEKALLASS
NIIKTVPGDGRQEQECDFDNRIMEGKLEGYSTLPGYRKGTLRPITIWKGNSFTTISARDP
QFSGKDSGKGDSDFNDSDSDISGDGHKNNSPPINSLWACTSECKILGHSDRCWSPSASRA
NTSLSHGPHLSTFSKTASLPRNTLQRDTYYQQAHLPKTNGLQSVYEKVQHQEFDYILVCP
PTPARILETGEISLPEYGHS
NT seq 2943 nt   +upstreamnt  +downstreamnt
atgatgcgtggcattttaacaggttggcatcggtcgatttttggattcataatactacaa
atgttatttgtctccctggctgagtctgagggaaatactctgaaataccagaccaacgag
gagcgaagtccaggaacagtgatcggaaacctggccatggacatgtccttgagtcgctct
tttagctccaagactaattttagaatgatgaaacaattcaacaattattttatcagggtg
agagaaagcgacggggagcttactgtcggggaaaggattgacagagagagaatctgcagg
cacactttacagtgtctcatcacttttgatgttgtcagtttttcaaaagagaggtacaaa
ttgattcatgtcgaggtcgaggtaaaagacatcaatgataactatccagagtttccgaac
aaggaatgtacagtggagatctctgaaaatgctgatgtagggttccgcattcctttggac
ccagcggaggacgcagacgtcggatcaaactacatccaaagctatcaaatttctgtcaac
ggtcatttttccattgatgtgcttttgagagcggatggggttaagtatgcggagttggtg
ctaatgaaagagttagacagggagactcagtcatcttatgtggtggagcttattgccacc
gacggaggaaacccatttaggtcgggttcaacaaaaataacaatacaagtgacggacttt
aatgacaaccgtcctgtttttgaccagaataatttctcggtcactttgcccgaggacgca
ccggttggattcgttttattggacttaaatgcagttgatccagatgaaggtttaaacgga
gaggtggtctatggattcggaaaacaggtttctgcagagatccgagaacttttcgaagtg
tacagtaaatccgggcgcataacgctcaagaacccagtggattttgagaccaagaaaaca
tatgagttagacgtgcaggcgactgatctaggagccaacccgatccccgccatctgtaaa
ataataattaatgtcaaagacgttaatgacaatgccccggaaatcagtattacgccaatg
acctccatctcaacaggcatcgcgtgtattagcgagacagcagaaaaggacagcctagtg
gctctgatcagcacctcggacggggactcgggcgtcaacagccaggtccattgcacctta
tatgggaacgaccatttcaaacttaaacaggcttatgaggacagctacatgattgtcacc
gcagcagccctggacagggagaagataagcgagtacaatttaactgtgatggctgaagat
ttcgggtcacctccattgagaaaaatcacagaatacaccatcaggctaagcgacgagaat
gacaacgccccacactttactaaacctgtctatgaagtttctgtcgtagaaaataatgca
ccaggggcatatattaccacggttgaggccagagatgcagacttggggactaatggcaaa
attacatacagacttttagacagtgttataatgggatcacctgtcaacacgtttgtatct
ctaaatgcaatctctggttcaatatatgcactaagaagcttcaactatgaagtcatgaaa
catctggaggtacacgtccaggcaagtgatgggggcttgccccagcttcagagcagtgcc
atcatcaatctaaaaataatggatcagaatgacaactctccctccatcgtggaacctgtc
cttaataagggatccgccaaggttttcctgcccaaacatgcacctgcaggttatgttgta
acccggttaaaggccacggacgctgacgaaggcataaacgcacagctgtcttacagcatc
actggtgggggacacttgggtttctccatcaacaaggttactggggagttacatgtgagt
tgtgagctgaactacgacctgtctgaaacactgagagtcgtagtggctgtcaatgacaat
gggacgccttctctgacctccacggccactatacacctcgctctcatcgaaggcacccct
cccagtgttcctgctatggtgcaaagcgacagcgaggaggtctttgaatgggacatgtcc
atagccattatcattgtcctagcagggagctgctccctcctcttgctaggcatcatcctg
atcactaccacctgcagtcgacgcaaacgggaaaagagagaggcggcgggatgtgaaaaa
gtagacatgccacatgtggagaagggggatagcagccatattgattcattgatcaccaac
cacaaaagcaatgcgtttgatgtgcacccttttcctgagaaagcactgttggcctccagc
aacattataaaaacagtccctggtgatggcagacaagaacaagagtgtgactttgacaac
agaataatggagggtaaattagagggttattcaacactgcccggctatcggaaaggaacc
ctccgacccataaccatatggaagggcaactcattcacaaccatctcagccagagatcct
cagttcagtgggaaggacagtgggaaaggagacagtgactttaacgacagcgactctgac
atcagtggagatggacacaaaaacaactccccaccgataaacagtctctgggcctgcacc
agtgagtgtaagatcctgggccactccgaccgatgctggagcccctcagcctccagagcc
aacaccagcctgtcccacggaccacacctctcaaccttctccaagacagcctcgctgcca
cggaacactctgcaaagagacacatactaccaacaggctcacctacccaagaccaacggt
ctgcaaagcgtctatgaaaaagtccagcaccaagaatttgattatattctggtttgtcca
ccaacaccagccaggatactagagactggtgagatatccctcccggagtatggacactct
taa

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