Coregonus clupeaformis (lake whitefish): 121536506
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Entry
121536506 CDS
T08357
Name
(RefSeq) amyloid-beta A4 protein isoform X1
KO
K04520
amyloid beta A4 protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121536506
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cclu00535
]
121536506
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121536506
Peptidases and inhibitors [BR:
cclu01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
121536506
Proteoglycans [BR:
cclu00535
]
Cell surface proteoglycans
Others
121536506
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Others
121536506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
DUF3792
VSG_B
Motif
Other DBs
NCBI-GeneID:
121536506
NCBI-ProteinID:
XP_041699767
LinkDB
All DBs
Position
23:complement(3775177..3840881)
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AA seq
751 aa
AA seq
DB search
MGERTTFLLLWVATLTLASEVPSDDSVGLLAEPQVAMFCGKFNMHVNVQSGKWESDPFGT
KSCIGTKEGILQYCQEVYPELQITNVVEANQPVSIQNWCKKGRKECSSHTHIVVPYRCLV
GEFVSDALLVPDKCKFLHQERMDMCESHLHWHTVAKESCGDRTMNLHDYGMLLPCGIDRF
RGVEFVCCPAETQRESDSVEMTESDVWWGGAETEYTDNGMPRQADQGAVTTEYDEDEEED
TFDRDEDGDGLEDEDDDDDEDDVTDERDSGEGASNIAMTTTTTTTTESVEEVVREVCWAR
AESGPCHAILERWYFMPEKGTCAPFLFGGCGGNRNNFDSEEYCLSVCSTSVLPTTAPSPP
DAVDRYLESPGDDSEHSNFQKAKESLEAKHRERMSQVMREWEEAERQAKSLPRADKKAVI
QHFQEKVEALEQEAAGERQQLVETHMARVEALLNSRRHMALENYLSSLQANPPRPRQVLG
LLKKYVRAEQKDRQHTLKHYEHVRMVDPKKAAQIRPQVMTHLRVIDERMNQSLGLLYNVP
SVANEIQDQVSVLMQRVQSELSQQVSSLQSDGRTDGRVSYGNDALMPDQAYSSAPLDPGM
GLDRLGFIHPESFNQPNTDNHVEPVDARPVPDRGLPTRPVSALKPEEFPEVRLEKEERQS
ASYEVHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVISLIMLRKKQYTSIHHGIIEVD
AAVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagcgaacgacatttctgctgttatgggtagcgaccttgacgctggcatctgag
gtgccttctgatgactcggtgggtctgctggcagagccccaggtagccatgttctgtggg
aaattcaacatgcatgtcaacgtccagagtggcaagtgggagtcggatcccttcggcacc
aagagctgcatcggaaccaaggagggcatcctgcagtactgccaggaggtgtaccctgag
ctccagatcactaacgtggtggaggccaaccagccagtcagcattcagaactggtgcaag
aagggacgcaaggagtgtagtagtcacacacacatcgtggtgccctaccgctgcctggtt
ggggagtttgtgagtgatgccctgctggttcctgataagtgcaagttcctgcaccaggag
agaatggacatgtgtgagagccacctgcactggcacaccgtggctaaagagtcctgcgga
gaccgcaccatgaatctccatgactacgggatgctgttgccatgcggcatcgaccgtttc
cgaggggtggaatttgtgtgttgcccagcggagacacagcgcgagtcagacagcgtggag
atgactgagtctgacgtgtggtggggcggagccgagactgaatacaccgataacggcatg
cctcgccaggcggatcagggggctgtcaccactgagtatgatgaggatgaggaagaggat
acctttgacagagacgaggacggagacggtcttgaggatgaagatgatgatgatgatgag
gatgatgtgaccgacgaacgggacagtggtgaaggcgcctccaacatcgccatgacaacc
accaccacgaccactactgaatcggttgaggaagttgtcagagaggtgtgttgggcgcgt
gctgagtcgggcccgtgccatgccattctggagcggtggtacttcatgccagagaagggc
acctgtgcccccttcctctttggagggtgcgggggcaaccggaataactttgactcagaa
gagtactgcctgtctgtctgcagcaccagtgtgttgcccaccacggccccctccccccct
gacgcggtggaccgttacctggagtctcccggagacgacagcgaacactccaacttccag
aaggccaaggagagtctggaggccaagcaccgcgagaggatgtcccaggtgatgagagag
tgggaggaagcagagagacaggccaagagtctccctcgcgctgacaagaaggcagtcatc
cagcacttccaggagaaggtggaggccctggagcaggaggcagcaggagagaggcagcag
ctggtggagacccacatggcccgagtggaggccctgctcaacagccgccgtcacatggcc
ctggagaactacctcagctccctgcaggccaacccacccaggcctcgtcaggtgcttggc
ctgttgaagaagtatgtccgtgcagaacagaaggacagacaacacaccctgaaacactac
gaacacgtccgcatggtggaccccaaaaaggctgctcagatccgaccccaggtgatgacc
cacctgcgtgtgattgacgagaggatgaaccaatccctggggctgctctacaatgtgccc
agcgtggccaatgaaatccaagaccaagtttctgtcctgatgcagagggttcagtcagag
ctgtctcagcaagtctcatctctgcagagcgatgggaggactgatggcagggtgagctat
ggaaacgatgccctgatgcccgaccaggcttacagctctgcccctctggaccctggcatg
ggcctggatcgactgggctttatccacccagagagcttcaaccagcctaacaccgacaac
cacgttgagcctgttgatgctcgtccagttccagatagaggtctgcccactcgacctgtc
tctgctctgaagcctgaggagttccctgaggtgcggctggagaaggaggagcggcaaagc
gccagctatgaagtgcatcaaaaactggtgttcttcgctgaggatgtgggctccaacaag
ggcgccataatcggcctgatggtgggcggggttgtcatagcgacggtcattgtcatctct
ctgatcatgctgaggaagaagcagtatacttctatccaccacggaatcatcgaggtggat
gctgcagtgaccccagaggagcgtcacctgtccaagatgcagcagaatggctatgagaac
cccacctataagttcttcgaacagatgcagaactaa
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