Coregonus clupeaformis (lake whitefish): 121536531
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Entry
121536531 CDS
T08357
Name
(RefSeq) nocturnin isoform X1
KO
K18764
nocturnin [EC:
3.1.3.108
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121536531
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.108 nocturnin
121536531
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
121536531
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
121536531
NCBI-ProteinID:
XP_041699812
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All DBs
Position
2:23995602..24010335
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AA seq
460 aa
AA seq
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MYPARRCSVLHRDLAAFCLASLGPAAKKEPAPRRFSLPASRYCHTGGGDGRSGKPQVKSR
GSSSASVSSGPVCPMGSSRLFGTLAQTLSSAPLVQQDYYPEHQDPDQDPEGLEQANPDQL
LRECEEALQNRPARPHRDLVYIADPTHQHQYRNHEQQNTPPIRVMTWNILAQALGEGKDV
FVRCPQEALIWAERKYLILEQILTYRPDILCLQEVDHYYDTFQPILASLGYHSTFLSKPW
SPCLDVASNNGPDGCALFYRRARFSLLSTSHLRLSAMMLPTNQVAIVQTLRCQETGQRLC
VAVTHLKARSGWERLRGAQGADLLQSLKAITSGPAGSDPVSRGAGGGNGTEGVPLIVCGD
FNAEPSEDVYKRFISSPLGLGSAYKLLSADGQTEPAFTTWKIRPSGESCSTLDYIWYSHD
AFTVNTLLDIPTEEEIGPDRLPSYHYPSDHLSLLCDVSFR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtatccggctcgtcggtgttcggtccttcaccgagacttggcagcattttgtcttgcc
tccctggggccggcagctaagaaagagccagctccgaggagattctcccttccggcttca
cggtactgtcacaccggaggaggagacggcagaagcggcaagccacaggtgaaatcacgc
ggctcatcgtccgcgtcggtgagctctggaccagtgtgtccgatgggcagcagcaggctg
tttggtaccctggcccagaccctgagcagtgctcccctggtccagcaggactactaccca
gagcaccaggacccagaccaggacccagagggcctggagcaggccaacccagaccagctg
ctcagagagtgtgaggaagccctccagaaccggccggcccggccacacagggacctggtc
tacattgcagacccaacacaccagcaccaatacaggaaccatgagcagcagaacacacca
ccaatacgggtcatgacgtggaacatcctagctcaagctctaggggagggtaaagacgtc
tttgtgcgctgtcctcaggaggctctgatctgggctgagcggaagtacctgatcctggag
cagatcctcacttaccgccctgacatcctgtgtctccaggaagtggaccactactacgac
accttccagcccatcctggccagcctgggctaccacagcaccttcctgtccaagccctgg
tccccctgcctggacgtggccagcaacaacggccctgacggctgtgctctcttctaccgc
cgcgcccgcttcagcctcctctctacctcccacctgcgcctctccgccatgatgctgcct
accaaccaggtggccatcgtgcaaacgctgcgttgccaggagacgggccagaggctgtgc
gtggccgtgacccacctgaaggcgaggagcggctgggagaggctgaggggtgcccagggg
gctgacctgctgcagagcctgaaggctatcacctcggggccggctgggtctgacccagtc
agtaggggagctgggggagggaatgggacagagggggtgcctctgatagtgtgtggggac
tttaacgctgagccctcggaggacgtatacaagcgttttatctcctcccccctgggtctg
ggctcagcctataagctgctgagtgcagacgggcagacagagccagccttcactacctgg
aagatccgtccctcaggggagagctgcagtaccctggactacatctggtactctcacgat
gctttcactgttaacaccctgctggacatacccactgaggaagagataggacctgaccgc
ctgccctcgtaccactacccctccgaccacctatcactgctctgtgatgtcagcttcagg
tag
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