Coregonus clupeaformis (lake whitefish): 121536532
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Entry
121536532 CDS
T08357
Name
(RefSeq) guanine nucleotide exchange factor DBS isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121536532
Membrane trafficking [BR:
cclu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121536532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
SH3_1
SH3_2
EspB_PPE
Spectrin
CRAL_TRIO
Spectrin_SESTD1
hSH3
Motif
Other DBs
NCBI-GeneID:
121536532
NCBI-ProteinID:
XP_041699815
LinkDB
All DBs
Position
23:complement(44959748..45050970)
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AA seq
1211 aa
AA seq
DB search
MSVHEFLREGAGEVPTRIMNRLSQMIQSLDISGLASPFTPTASRKNSWTDWNWNDEIMQQ
ESSPLCAIDITPDLRKKFAFLSGGRGQNGSPIIVFPEFSAFGEIQEREFHNVLTYLTSVP
SLFAAGVGFILVIDRRQDRWAAVKGTLLRIAGSFPGNLQLVLVLRPTTLFQRTLSDILFK
FNKDEFKMKVPVIMLSSVTELHSYIDRTQLTTELGGTQEYCHDKWISHRTAIEGFALMVK
GTAQILQSFGTELAETEVPNEIQATVNLLRTHTNKKDKMKEDLQVALGQGSRLLERINEP
VVRDPDHSMNQDELENLATVQRLLSQLDETERAFDEFWVTHQAKLEQCLQLRHFEHNFRE
VRCLLDQVAERLTAFSEVGINPAHADHIIRELNSHEERVLEVLDRAQALAREGDELIQSS
HYAEDSIHPKCSELRAVSEELSANLRAKKDHLLRAMELHHNLERAAKWCDDGLYLLASQP
VDKCQSHEGAETALQEIERYLDTAGQNKLTDPSVICSDYETVLNQDFRDQVEKVFQKQVS
MQEMFEKRMVSLKKLAAKQTRPVQPVAPRPEAFIKSPLSSPAKRVMEKSCSEGDSVNGVS
CRTVEDQLQNNRSASLSEEDENLAILRKHVMNELLETERGYVEELHCVLQGYASEMDNPA
MASLMPAPLQNKKDVLFGNMPEIYHFHKRTFLRELEEYQDCPELVGHCFLERMTDLQIYE
KYCQNKPRSESLWRQCSDCAFFQECQKKLEHKLGLDSYLLKPVQRITKYQLLLKELLKYS
KGCEGSEDLQEALTSILGILKAVNDSMHLIAITGYDGHLGDLGRLLMQGSFSVWTEHKKG
HAKVKDLARFKPMQRHLFLHEKALLFCKRREENGEGYEKAPSYSFKQSLSMSAVGITENA
KGDNKKFEVWCNSREEVYIVQAPTSDVKTTWVNEIRKVLTTQLEAYREASQQRPSDGLFQ
FPPAAGGPVSLGPFRRGERSMKEKKGEPSSPDPNSCSSPKTKDEAMTSPTLDRAAVAKKR
FTLQGFSNFSKDLSPPDNKSLTLPRMPLSLPGSPTSPDHKTKRHEIKSDPTPFGFKGWTK
GSLSLDANEENDGYSSTEEPLTSDPEDEGGKKLRAGKYTVVSDYEKIRAQDLSVKSGETV
QLIKKGEDGQWFVKNLKTKQEGWVAAANLHTLIGESTSCQSLTSSEGSGSGNLSTSSSCC
ETYTSFSDIKP
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtccatgagtttctgcgggagggggcaggcgaagtgcccacccggatcatgaac
agactgagtcagatgatccagagcctggacatctctggcctggcctcccccttcaccccc
acagccagccgtaaaaactcctggacggactggaactggaacgatgagatcatgcagcag
gagagcagccccctctgtgccatcgacatcacccctgaccttaggaagaagtttgccttc
ctctcagggggccgaggacagaacggcagccccatcatcgtgttcccagagttctctgct
ttcggagagattcaggagagggagttccacaacgtgctcacttacctgaccagcgtcccc
agtctgtttgcagcaggagtgggtttcattctagtcattgaccgacggcaggaccgatgg
gcggccgtcaaggggaccctgctccgcatcgcaggttcgttcccagggaacctgcagttg
gttctggtattgaggccgaccacattattccagaggactctatcagacatcctgttcaag
ttcaataaggatgagttcaagatgaaggtgccggtcattatgttgagttctgtgactgag
cttcactcctacatagaccggacacaactgactactgagctaggaggaacccaggagtac
tgccatgacaagtggatctcacaccgcaccgccattgagggctttgctttgatggtgaag
ggaacagctcagatcctgcagtcatttgggacagagctagcagagactgaagtacccaac
gagatccaggctaccgtcaacttactgaggacacacacaaacaagaaagacaagatgaag
gaggatctgcaggtggctctaggacagggcagcagactgttggagaggattaatgaacca
gtggtcagagatcccgaccacagcatgaaccaggacgaactggagaatctggccaccgta
cagagactgctgtcccagttggatgagacagagcgggcgtttgatgagttctgggtgaca
caccaggctaagctggagcagtgtctgcagctccgtcactttgaacacaacttcagagag
gtgagatgtctgcttgaccaggtggcagagagattgacagctttctcagaggtgggaata
aaccctgcccatgctgatcacatcatccgtgagctgaacagccacgaggagagagtctta
gaggtattggaccgagcccaggctctggcacgtgagggtgacgagttgatccagagctcc
cactacgctgaggactccatccaccccaaatgtagcgagctccgagccgtgagcgaggaa
ctgagtgccaacctgagagcaaagaaagaccacctactcagagctatggagctacaccac
aatctggagagggctgctaagtggtgtgatgatggcctctacctgctggcctcccaaccc
gtggacaagtgtcagtcacatgaaggggcggagacagcgctgcaggagatcgagcgttac
ctagatacggcaggacagaacaaactgactgatcctagcgtcatctgcagtgattacgag
acagtgctcaaccaggacttcagggaccaagtagagaaggtctttcagaagcaggtgtcc
atgcaggagatgtttgagaagaggatggtcagtctgaagaagctggcagccaaacagacc
aggccagtccagcctgtggccccaaggcctgaagccttcatcaagtccccactgtcctcg
ccagcaaagagagtgatggagaagagctgctcagagggagactctgtgaatggggtcagc
tgtagaacagtggaggaccagctacagaacaacagaagtgcctctctgtcagaggaggac
gagaacctggccatcctcagaaaacatgtaatgaatgagctgctggagacagagaggggg
tacgtggaggaactgcactgtgtcctacagggctatgcctcagagatggacaacccagcc
atggccagcctcatgccggctccactacagaacaagaaagatgtgctgtttggcaacatg
ccagagatctaccacttccacaagagaacctttctgagggagttggaagagtaccaagac
tgcccagaacttgtgggtcattgttttctggagaggatgacagacctgcagatctatgag
aagtattgtcagaataagcctcgctctgagagcttgtggagacaatgctccgactgcgcc
ttcttccaggaatgtcagaagaagctggaacataaactgggcttggactcctatctcctg
aaaccggtccagaggatcaccaaataccagctcctgttgaaggagctactaaagtacagt
aagggctgtgaggggtcagaggaccttcaggaggcgctcacctctatcctgggcatcttg
aaggctgtcaacgactccatgcacctcatcgctatcactggatacgatggtcacctgggt
gacctgggccggctgctgatgcaggggtcattcagcgtatggacggaacacaagaaaggt
cacgccaaggtcaaggacctggcccgcttcaagcccatgcagagacacctgttcctgcat
gagaaagccctgctcttctgtaagagacgcgaggagaacggggagggctatgagaaagcc
ccctcctacagcttcaaacagtccctcagcatgagtgctgtgggcatcactgagaatgcc
aaaggtgacaacaagaagtttgaggtctggtgcaactcacgggaggaggtgtacatcgta
caggccccgacatctgatgtgaaaacgacgtgggtgaacgagatccgtaaggttctgaca
acacagctggaggcctacagagaagccagccaacagaggccgtcagacggactgttccag
ttccctcctgccgctggaggacctgtcagcctcggtccatttagaagaggggagaggagc
atgaaggagaagaagggagaaccgagcagccccgatcctaactcctgctcctccccaaaa
accaaagacgaggcaatgaccagtcctaccttagacagagcagcagtggctaaaaagcgt
tttaccttgcagggcttcagcaacttcagcaaagacctctcacctcctgacaataaaagc
ttaactttacccaggatgcctctctctctgccaggttctcccacaagccctgaccataaa
accaaacgtcatgagataaagagtgatcccactccgttcggcttcaaaggatggaccaag
ggctctctctcattggacgccaacgaggagaatgatgggtactctagcactgaggagccc
ctaacctcagaccctgaggacgaggggggaaagaaactgcgtgcagggaagtacacagtg
gtgtctgactatgagaagatcagggcccaggatctgtcagtcaagagtggtgaaacggtt
cagctgatcaagaagggagaagatggacagtggtttgtgaagaatctgaagactaagcag
gagggctgggtggctgcagccaaccttcacaccctgattggagagtccacgtcctgccag
tctctcaccagttcagagggcagtggctcagggaacctcagcacttcatccagctgctgt
gagacctacaccagcttctctgacataaagccctga
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