Coregonus clupeaformis (lake whitefish): 121536537
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Entry
121536537 CDS
T08357
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121536537 (aff3)
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
121536537 (aff3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
DUF6857
Motif
Other DBs
NCBI-GeneID:
121536537
NCBI-ProteinID:
XP_045062406
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All DBs
Position
23:45389419..45431391
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AA seq
1184 aa
AA seq
DB search
MEVTGSDRNGCAKDILVDMTHSWPSQQPSGGGQAQRFPYKGHEQSASWTGNNSLSEQHTH
THGGRVRRSSSDSSGSNSSGSDSSSESEEESSSHRSRSPSPETHSDPGTPTDTQSLSCTE
ETDHPSTTQWQLDKWLKKVRKKSFSWDQDSSNRDHAQRATEHSSPSPDPHGAPSPARFWG
TREDYSPSQSPVPSPHFNYSPRHSPRPSPGCSPCPSPCPSPSPRHSPIPSPVPSVCPSPC
LSPRASRSPSPIPRHPPRSPSPSLTQSSSRHYPQVRSLHQESIRPLKRPSLTISPSHRPK
IRIAPAPSIEPKSKLRHSSSPQPPLQHSSRPKPTQSQSVPTPKNTAKAAPALSTELSHRP
RPRPSPNSSPRLHSRSNLKHNPILALKTSQHPSTSGQRPKESSRLSHNSNSNHRPKFGPG
LTTSLSTSPSPTPGAKTLPATDPSRETSSRIGDSSKSSTKPHSRPISKAGSGPSSRSSPS
PRPKVKSREAPSPHTKPPQRKPQSREREREGVRQGEKEGKRQGEKQKERKGERKGERRLA
EEKLLRRPWIQSSEEEEEEDVEERKRRREEREREEKRRRRKKQPQQQRGEWQAVQPKQRP
HTNSERHRNPIDPQRHGTKKKRRRKSEEEDRESQPDPSLPPSPSSPTPVIPPTDSSSSSS
SSSESDSEPSLPPNVAKVPADSTSSQRPIPRRGHQGPGRPADSRPGVLYPRGTATSNQGQ
GPQSQGKQKLYTLVPFGRSEQAPASHRGLRNLVVQLDLSLLNRVPDTTTDTPAFHKHPSS
SSSSSSSKQKEAMRHLYTPETEGGDSRRKRKSENGVQHHRESKRRNSHTNGPSAHTESTA
NRRLDPHSDARHNGFLEDYLDSKRPLSPLSPLSDTPDPTKPPIITQPPEQHYTNSEMPRT
HAKMEVECVGVSGQPPPKCESWGPPLRRAGSQRGTVLNHEPPHHAEYYMHEAKRMKHRAD
AMVDKLGKAVNYVDAALSFMECGKAMEEGPLEAKSPYTMYTETVELIRYAMRLKNHSGPG
ARQEDKQLAVLCFQCLALLYWQMFRLKKDNAMKYSKALLDYFKSSPKVPTTPPIWSDSGK
GTGGPASSLSPSPSALTLGSSPSSLISIPQRIHQMAANHLNITNNVLYSYEYWELAESLA
RDNNEFFNYLNTLSGPLTLHSSIAHAVQYTRQALQWIRISANVG
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcacaggaagtgatcgtaacggctgtgccaaagatattctagtggacatgacc
cactcctggccgtcccagcaaccctcaggagggggtcaggcccagcgcttcccctacaag
ggccatgagcagtcagcctcctggactggtaacaacagtctgtcggagcagcacacacac
acacatggtgggagggtgagacgttccagctccgactcttcaggctccaactcttcaggc
tcagactcctccagtgagtcggaggaggagagcagtagccatcgctcccgtagccccagc
ccagaaacacactccgatcctgggacacccaccgacactcagtctctcagctgcactgag
gagacagatcacccctccaccactcagtggcagctggataagtggctgaagaaagtcaga
aaaaaatccttctcctgggaccaggattccagcaaccgcgaccacgcccagagagctaca
gagcacagctcgccctccccagacccccacggagccccgtctccggccagattctggggg
accagagaggactacagtcccagccagagccctgttcccagcccacacttcaactacagc
cccaggcatagccctcggcctagccctggctgtagcccctgtcccagtccttgccctagc
cccagcccaagacacagccccatccctagcccggtccccagtgtctgtccgagcccctgc
ctcagccccagagccagccgcagccctagccccataccccggcacccccctaggagtcct
agtcctagccttactcagtctagctcccgtcactatcctcaggttcggagtcttcatcag
gaaagcatcaggcctctcaagcggcctagcctaacaatcagcccgagccatagacccaaa
atcaggatcgcacctgctcccagcattgagcccaagagcaaactgaggcacagttcctct
ccccagcctccgcttcagcacagctccaggcctaaacccacacagagccagtctgttccc
actcccaagaacacagccaaggcagcacctgctctgagcactgagctgagccacagaccc
agacccaggcctagtcccaactccagtcccaggcttcattctcggtctaatttgaaacac
aaccccatccttgccctcaaaaccagccaacacccatcaacctctggacaaaggcccaag
gagagtagcagactcagccacaattccaactccaaccacaggcccaagtttgggcctggt
ttgacaaccagcctcagtaccagtcccagtcccacaccaggggccaagaccttacctgcc
acagacccaagcagagagaccagcagcagaattggtgacagttccaaatcgagcaccaag
ccacattctcggcctatctccaaagctggttctgggcctagctctagatcaagccctagt
cctagacccaaagtcaagtcccgggaggccccttctccccacacaaagcctccgcagagg
aagccccaatccagggagagagagcgggagggagtgaggcagggggagaaagagggaaag
aggcagggggagaaacagaaggaaagaaagggggaaagaaagggagagcgaagactggcg
gaggagaagttgctaagacgcccctggatccagagctcagaggaagaggaggaagaggac
gtagaggagagaaagaggaggagggaggagagagagagggaggagaagaggaggaggagg
aagaaacaaccgcagcagcagagaggtgaatggcaggcggtccagcccaagcaaagacct
cacaccaacagcgagcgacaccgcaatcccatcgatccacaacgccacgggaccaagaaa
aagaggaggaggaagagtgaggaggaagatagagagtctcagccggacccttcccttccg
ccatcgccctcctcccccactcctgtcatccctcccacagattcctcgtcttcctcctct
tcatcatcagagtccgactctgagcccagtctgcctcccaacgtcgccaaagtcccagcc
gactccacgtccagccagcgtcctatccccaggagagggcaccagggcccggggaggcct
gcagacagcaggcctggagtgctctaccccaggggcactgccacatccaaccaaggccag
gggccgcagagccagggaaagcagaaactctacaccctggtcccgtttgggcgtagtgaa
caggccccagcctcccatcgaggcctgaggaatctggtggtgcagttagacctctccctg
ctcaacagagtgcctgacactacgacagacaccccagcctttcacaaacatccctcctct
tcctcctcctcttcctcttccaagcaaaaagaggccatgagacacctatacacccccgag
acagagggaggagacagcaggaggaaacgcaagtcagagaatggagtccagcaccacaga
gagagtaagaggaggaactcccacaccaacggcccctcagcccacacagagtctacagct
aacagacgtctagacccccactcagatgccagacacaacgggttcttggaggactacctg
gacagtaagaggccactgtcccccctgtcccctctctctgacaccccggaccccaccaag
ccccccatcataacacagcccccagagcagcactacacaaacagtgagatgcccaggact
catgctaagatggaggtggagtgtgtaggtgtgtcagggcagcccccgcccaagtgtgaa
tcctggggacctcctttgcgacgggcagggagccagagaggaactgtactcaaccatgaa
cccccacaccatgctgagtactacatgcatgaggcgaagaggatgaagcaccgtgcagat
gccatggtggataagctggggaaggcagtgaactatgtagatgctgctctctccttcatg
gagtgtggcaaagctatggaggaggggccgctggaggccaagtctccctataccatgtac
acagagacagtagagctcatcaggtatgccatgaggttgaagaaccactctggccctggg
gccagacaggaagacaaacagttggccgtactgtgtttccagtgccttgcactcctgtac
tggcagatgtttcgtctgaagaaggacaacgccatgaaatactccaaagctctactggac
tactttaagagttctcccaaagtgcctactacaccccccatctggagcgactcaggaaag
ggcacaggggggcctgcatcctccctctcccccagcccctcagccctcaccctgggcagc
tccccctcttccctcatcagcattccccagcgcatccaccagatggcagcaaaccacctg
aacatcaccaacaatgtcctgtacagctatgagtactgggagctagcagaaagcctggcc
agagacaacaatgagttctttaactacctgaatactctgtcagggccattgactctccac
agtagtattgctcatgcagtccagtacaccagacaggctctgcagtggatacgcatcagt
gccaatgtgggctag
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