KEGG   Coregonus clupeaformis (lake whitefish): 121536537
Entry
121536537         CDS       T08357                                 
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3
  KO
K15195  AF4/FMR2 family member 3
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cclu03021]
    121536537 (aff3)
Transcription machinery [BR:cclu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     121536537 (aff3)
SSDB
Motif
Pfam: AFF4_CHD DUF6857
Other DBs
NCBI-GeneID: 121536537
NCBI-ProteinID: XP_045062406
LinkDB
Position
23:45389419..45431391
AA seq 1184 aa
MEVTGSDRNGCAKDILVDMTHSWPSQQPSGGGQAQRFPYKGHEQSASWTGNNSLSEQHTH
THGGRVRRSSSDSSGSNSSGSDSSSESEEESSSHRSRSPSPETHSDPGTPTDTQSLSCTE
ETDHPSTTQWQLDKWLKKVRKKSFSWDQDSSNRDHAQRATEHSSPSPDPHGAPSPARFWG
TREDYSPSQSPVPSPHFNYSPRHSPRPSPGCSPCPSPCPSPSPRHSPIPSPVPSVCPSPC
LSPRASRSPSPIPRHPPRSPSPSLTQSSSRHYPQVRSLHQESIRPLKRPSLTISPSHRPK
IRIAPAPSIEPKSKLRHSSSPQPPLQHSSRPKPTQSQSVPTPKNTAKAAPALSTELSHRP
RPRPSPNSSPRLHSRSNLKHNPILALKTSQHPSTSGQRPKESSRLSHNSNSNHRPKFGPG
LTTSLSTSPSPTPGAKTLPATDPSRETSSRIGDSSKSSTKPHSRPISKAGSGPSSRSSPS
PRPKVKSREAPSPHTKPPQRKPQSREREREGVRQGEKEGKRQGEKQKERKGERKGERRLA
EEKLLRRPWIQSSEEEEEEDVEERKRRREEREREEKRRRRKKQPQQQRGEWQAVQPKQRP
HTNSERHRNPIDPQRHGTKKKRRRKSEEEDRESQPDPSLPPSPSSPTPVIPPTDSSSSSS
SSSESDSEPSLPPNVAKVPADSTSSQRPIPRRGHQGPGRPADSRPGVLYPRGTATSNQGQ
GPQSQGKQKLYTLVPFGRSEQAPASHRGLRNLVVQLDLSLLNRVPDTTTDTPAFHKHPSS
SSSSSSSKQKEAMRHLYTPETEGGDSRRKRKSENGVQHHRESKRRNSHTNGPSAHTESTA
NRRLDPHSDARHNGFLEDYLDSKRPLSPLSPLSDTPDPTKPPIITQPPEQHYTNSEMPRT
HAKMEVECVGVSGQPPPKCESWGPPLRRAGSQRGTVLNHEPPHHAEYYMHEAKRMKHRAD
AMVDKLGKAVNYVDAALSFMECGKAMEEGPLEAKSPYTMYTETVELIRYAMRLKNHSGPG
ARQEDKQLAVLCFQCLALLYWQMFRLKKDNAMKYSKALLDYFKSSPKVPTTPPIWSDSGK
GTGGPASSLSPSPSALTLGSSPSSLISIPQRIHQMAANHLNITNNVLYSYEYWELAESLA
RDNNEFFNYLNTLSGPLTLHSSIAHAVQYTRQALQWIRISANVG
NT seq 3555 nt   +upstreamnt  +downstreamnt
atggaggtcacaggaagtgatcgtaacggctgtgccaaagatattctagtggacatgacc
cactcctggccgtcccagcaaccctcaggagggggtcaggcccagcgcttcccctacaag
ggccatgagcagtcagcctcctggactggtaacaacagtctgtcggagcagcacacacac
acacatggtgggagggtgagacgttccagctccgactcttcaggctccaactcttcaggc
tcagactcctccagtgagtcggaggaggagagcagtagccatcgctcccgtagccccagc
ccagaaacacactccgatcctgggacacccaccgacactcagtctctcagctgcactgag
gagacagatcacccctccaccactcagtggcagctggataagtggctgaagaaagtcaga
aaaaaatccttctcctgggaccaggattccagcaaccgcgaccacgcccagagagctaca
gagcacagctcgccctccccagacccccacggagccccgtctccggccagattctggggg
accagagaggactacagtcccagccagagccctgttcccagcccacacttcaactacagc
cccaggcatagccctcggcctagccctggctgtagcccctgtcccagtccttgccctagc
cccagcccaagacacagccccatccctagcccggtccccagtgtctgtccgagcccctgc
ctcagccccagagccagccgcagccctagccccataccccggcacccccctaggagtcct
agtcctagccttactcagtctagctcccgtcactatcctcaggttcggagtcttcatcag
gaaagcatcaggcctctcaagcggcctagcctaacaatcagcccgagccatagacccaaa
atcaggatcgcacctgctcccagcattgagcccaagagcaaactgaggcacagttcctct
ccccagcctccgcttcagcacagctccaggcctaaacccacacagagccagtctgttccc
actcccaagaacacagccaaggcagcacctgctctgagcactgagctgagccacagaccc
agacccaggcctagtcccaactccagtcccaggcttcattctcggtctaatttgaaacac
aaccccatccttgccctcaaaaccagccaacacccatcaacctctggacaaaggcccaag
gagagtagcagactcagccacaattccaactccaaccacaggcccaagtttgggcctggt
ttgacaaccagcctcagtaccagtcccagtcccacaccaggggccaagaccttacctgcc
acagacccaagcagagagaccagcagcagaattggtgacagttccaaatcgagcaccaag
ccacattctcggcctatctccaaagctggttctgggcctagctctagatcaagccctagt
cctagacccaaagtcaagtcccgggaggccccttctccccacacaaagcctccgcagagg
aagccccaatccagggagagagagcgggagggagtgaggcagggggagaaagagggaaag
aggcagggggagaaacagaaggaaagaaagggggaaagaaagggagagcgaagactggcg
gaggagaagttgctaagacgcccctggatccagagctcagaggaagaggaggaagaggac
gtagaggagagaaagaggaggagggaggagagagagagggaggagaagaggaggaggagg
aagaaacaaccgcagcagcagagaggtgaatggcaggcggtccagcccaagcaaagacct
cacaccaacagcgagcgacaccgcaatcccatcgatccacaacgccacgggaccaagaaa
aagaggaggaggaagagtgaggaggaagatagagagtctcagccggacccttcccttccg
ccatcgccctcctcccccactcctgtcatccctcccacagattcctcgtcttcctcctct
tcatcatcagagtccgactctgagcccagtctgcctcccaacgtcgccaaagtcccagcc
gactccacgtccagccagcgtcctatccccaggagagggcaccagggcccggggaggcct
gcagacagcaggcctggagtgctctaccccaggggcactgccacatccaaccaaggccag
gggccgcagagccagggaaagcagaaactctacaccctggtcccgtttgggcgtagtgaa
caggccccagcctcccatcgaggcctgaggaatctggtggtgcagttagacctctccctg
ctcaacagagtgcctgacactacgacagacaccccagcctttcacaaacatccctcctct
tcctcctcctcttcctcttccaagcaaaaagaggccatgagacacctatacacccccgag
acagagggaggagacagcaggaggaaacgcaagtcagagaatggagtccagcaccacaga
gagagtaagaggaggaactcccacaccaacggcccctcagcccacacagagtctacagct
aacagacgtctagacccccactcagatgccagacacaacgggttcttggaggactacctg
gacagtaagaggccactgtcccccctgtcccctctctctgacaccccggaccccaccaag
ccccccatcataacacagcccccagagcagcactacacaaacagtgagatgcccaggact
catgctaagatggaggtggagtgtgtaggtgtgtcagggcagcccccgcccaagtgtgaa
tcctggggacctcctttgcgacgggcagggagccagagaggaactgtactcaaccatgaa
cccccacaccatgctgagtactacatgcatgaggcgaagaggatgaagcaccgtgcagat
gccatggtggataagctggggaaggcagtgaactatgtagatgctgctctctccttcatg
gagtgtggcaaagctatggaggaggggccgctggaggccaagtctccctataccatgtac
acagagacagtagagctcatcaggtatgccatgaggttgaagaaccactctggccctggg
gccagacaggaagacaaacagttggccgtactgtgtttccagtgccttgcactcctgtac
tggcagatgtttcgtctgaagaaggacaacgccatgaaatactccaaagctctactggac
tactttaagagttctcccaaagtgcctactacaccccccatctggagcgactcaggaaag
ggcacaggggggcctgcatcctccctctcccccagcccctcagccctcaccctgggcagc
tccccctcttccctcatcagcattccccagcgcatccaccagatggcagcaaaccacctg
aacatcaccaacaatgtcctgtacagctatgagtactgggagctagcagaaagcctggcc
agagacaacaatgagttctttaactacctgaatactctgtcagggccattgactctccac
agtagtattgctcatgcagtccagtacaccagacaggctctgcagtggatacgcatcagt
gccaatgtgggctag

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