Coregonus clupeaformis (lake whitefish): 121536559
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Entry
121536559 CDS
T08357
Name
(RefSeq) transcription factor Dp-1-like isoform X2
KO
K04683
transcription factor Dp-1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03083
Polycomb repressive complex
cclu04110
Cell cycle
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121536559
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121536559
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121536559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121536559
03036 Chromosome and associated proteins [BR:
cclu03036
]
121536559
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
121536559
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
121536559
BRITE hierarchy
Motif
Pfam:
DP
E2F_TDP
alpha-hel2
Motif
Other DBs
NCBI-GeneID:
121536559
NCBI-ProteinID:
XP_041699867
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All DBs
Position
23:complement(46518431..46544769)
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AA seq
420 aa
AA seq
DB search
MPTKTAVEEAEEKSALVGLMETNGELKVFIDQNRSPSKGVLSLVAVHPASIPMAKQLLPK
TLGPSNVNIAPHMVIGTPQRPSVSSAILVNSPHTPNSQFLTQSQPADASPWSSGKRGKKG
EKNGKGLRHFSMKVCEKVQKKGVTTYNEVADELVAEFSATDNHISPNDSHVYDQKNIRRR
VYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLDRIKQKQSQLQELIL
QQIAFKNLVQRNRQTEQQANRPPPPNSLIHLPFIIINTSKKTVIDCSISNDKFEYLFNFD
NMFEIHDDIEVLKRMGMACGLEVGKCSPEDLKVARSLVPKALEPYVTEMAQGPISNVYIT
GGSSTNGRRHHGQGSDSGADGTRASSSNDSHYSGSRVETPVSYMGDDDEEDDYDENDDED
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaaaaacagccgtcgaagaagcagaagaaaagagtgcacttgttggtctgatg
gaaaccaatggagaactgaaggttttcatcgaccagaatcggagtcccagtaaaggtgtc
ctgtctctggttgctgtccatcctgcgtccatccccatggccaaacaactactgcctaaa
accctggggccctccaatgtcaacattgctccacacatggtgattggtacgccccagagg
cctagtgtttccagtgccatactggtgaatagccctcacacacccaactcccagttcctc
acacagagccagccggccgacgcgtcgccatggtcctcggggaagcgtggtaagaagggg
gagaagaatggcaagggtctgaggcatttctccatgaaggtgtgtgagaaggtgcagaag
aaaggggtgacaacctacaacgaggtggcagacgagctggtggcagagttcagcgctaca
gacaaccacatctcccccaacgactcacatgtgtatgaccagaagaacatccgacggcgt
gtgtacgacgcgctcaacgtgctcatggccatgaacatcatctctaaagagaagaaagag
atcaagtggatcggtctgcccaccaactcagcacaggaatgccagaacctagaagtggag
agacaaaggagactggataggatcaagcagaagcagtcacaactccaagagctcatatta
cagcaaatagcctttaagaacctggtgcagcggaacagacagacggaacagcaggccaac
agacctccgccccccaactctctcatccacctccccttcatcatcatcaacaccagcaag
aagaccgtcatcgactgtagcatctccaatgacaagtttgagtacctgtttaactttgac
aacatgtttgagatccacgacgacattgaggtgctgaagcgtatgggcatggcctgtggc
ctggaggtgggcaagtgttccccggaggacctgaaggtggcacgcagcctggtgcccaaa
gccctggagccctatgtcacagagatggcccagggccccatcagtaatgtctacatcact
ggaggatcctccaccaacgggcggcgccatcacggccagggcagtgacagtggtgcagat
gggacccgggcctccagctctaatgactctcactacagcggctcccgtgttgagacccct
gtgtcgtacatgggggatgatgacgaggaggacgactacgatgagaacgacgatgaagat
taa
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