Coregonus clupeaformis (lake whitefish): 121536638
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Entry
121536638 CDS
T08357
Name
(RefSeq) actin-related protein 3
KO
K18584
actin-related protein 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
cclu04517
IgSF CAM signaling
cclu04519
Cadherin signaling
cclu04530
Tight junction
cclu04810
Regulation of actin cytoskeleton
cclu05100
Bacterial invasion of epithelial cells
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121536638
04519 Cadherin signaling
121536638
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121536638
09144 Cellular community - eukaryotes
04530 Tight junction
121536638
09142 Cell motility
04810 Regulation of actin cytoskeleton
121536638
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121536638
05100 Bacterial invasion of epithelial cells
121536638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121536638
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121536638
04147 Exosome [BR:
cclu04147
]
121536638
Membrane trafficking [BR:
cclu04131
]
Others
Actin-binding proteins
Arp2/3 complex
121536638
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
121536638
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121536638
Exosomal proteins of other body fluids (saliva and urine)
121536638
Exosomal proteins of bladder cancer cells
121536638
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Actin
MreB_Mbl
FtsA
Robl_LC7
Motif
Other DBs
NCBI-GeneID:
121536638
NCBI-ProteinID:
XP_041699981
LinkDB
All DBs
Position
23
Genome browser
AA seq
414 aa
AA seq
DB search
MAGRLPACVVDCGTGYTKLGYAGNTEPQFIVPSCIAIKESAKVGSRTVKGVDDLDFFIGD
EGIDKPNYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENRE
YTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGY
VIGSCIKHIPIAGRDITYFTQQLLREREVGIPPEQSLETAKAVKERFSYVCPDLVKEFSK
YDTDGSKWIKQYTGINNISKKEFTVDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVI
QNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKMSEELSGGKLKPKPID
VQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcaggacgattaccggcgtgtgttgtcgactgtggtacaggatacactaagctgggg
tatgcagggaacacagagccacagttcattgttccatcatgtattgcaatcaaagagtcg
gccaaggttggatcaaggacggtcaagggggtggacgacctggacttcttcatcggagac
gaggggatagacaagcccaattacgccacaaagtggcccatccgtcacggcatcgtggag
gactgggacctaatggagaggttcatggagcaggtcatcttcaagtacctgagggcagag
cctgaggaccactacttcctgttgacagagcctcctctgaacacaccagagaatagagag
tacacagcagagatcatgtttgagtccttcaacgtcccagggctctacatcgcagtgcag
gctgtcctggcactggcggcctcctggacatccagacaggtaggggagaggacactgacg
gggacggtcatcgacagtggagacggagtcacccacgttatccctgtggctgagggctac
gtcatcggcagctgtataaagcacattcccatcgcgggtcgtgacatcacctacttcacc
cagcagcttctgagggagcgggaggtgggcatccccccagagcagtccctggagacagcc
aaggcagtcaaggagcgcttcagctacgtgtgtccggacctagtgaaagaattcagcaag
tacgacacggatggctccaagtggatcaagcagtacaccggcattaacaacatcagcaag
aaggagttcaccgtcgacgtgggctacgagcgcttcctcggccctgagatcttcttccac
ccggagtttgccaatcctgacttcacccagcccatctccgaagttgtggacgaggttatc
cagaactgccccattgatgtcagacgtcctctttacaagaacattgtcttgtcgggcggc
tccaccatgttcagggactttggccggcgcctgcagagggacctgaagaggacggtggac
gccaggctgaagatgagcgaggagctgagcgggggcaagctcaagcccaaaccaatcgat
gtgcaagtcatcactcatcatatgcagagatatgcagtgtggtttggaggatccatgtta
gcctcaactcctgaattctaccaggtatgccacaccaaaaaggactatgaggagattggc
cccagcatctgtcgccacaaccccgtgttcggagttatgtcttaa
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