Coregonus clupeaformis (lake whitefish): 121536650
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Entry
121536650 CDS
T08357
Name
(RefSeq) double-stranded RNA-specific editase 1-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121536650
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121536650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
121536650
NCBI-ProteinID:
XP_041699996
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All DBs
Position
23:complement(15487345..15661805)
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AA seq
698 aa
AA seq
DB search
MDVDEEENMSSSSTDVKENRNLDNVSSKVGEAVAEQLPNGSGGGSRKRPLEEGNNGHTHS
KFRAKKRKKTPGPVLPKNALMQLNEIKPGLQYKLLSQTGPVHAPVFVMTVEVNGQLFEGS
GPTKKKAKLNAAEKALRSFVQFPNASEAHLAMGRTLTVNTDFTSDQADFPDMLFNGFETP
APPEDSFYLGSNGSSSLNSLGEYSMPSTPGANLAQALLPPPSSFTSPSSGKNPVMILNEL
RPGLKYDFVSESGESHAKNFVMQVLVDSQQFEGSGRNKKLAKARAAQAALSALFNMQLDQ
TPSQQPIPREGLQLHLPQVLANAVSRLVVDKFSELTDNFTSPHARRKVLAGVVMTTGTDV
KEAQVICVSTGTKCINGEYMSDRGLALNDCHAEIIARRSLIRYLYAQLEHFLSNNKEEQQ
KSIFMRCDKRGYRLKDNVQFHLYISTSPCGDARIFSPHEAGMEDQGDRHPNRKARGQLRT
KIESGEGTIPVRTSNTIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLMSYFTEPIYF
SSIILGSLYHGDHLSRAMYQRIADIEDLPQQFSLNRPLLSGISNAEARQPGKAPNFSVNW
AVGDQALEVINATTGKDDMGRASRLCKHALYSRWIRLHSKLSSTLRIKVSKPSSYHDAKQ
AAVEYHNAKQTLIKVFHKSGLGAWVKKPIEQDQFSLNS
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggatgaagaggagaacatgagttcgagcagcaccgacgtaaaggaaaaccgt
aacctggacaacgtctcctccaaagtgggggaggctgtggctgagcagctccccaacggc
agtggcgggggcagcaggaagcgccccttagaggagggaaacaatggccacacgcactcc
aagttccgggccaagaagcgtaagaaaacgccaggcccggttctacccaagaatgccctt
atgcagctgaatgaaattaagccggggctgcagtataagctgctatctcaaacaggtccg
gtccacgctcccgtgtttgtcatgaccgtcgaggtcaatgggcagctgttcgagggctca
ggtcccaccaagaagaaggccaagctgaatgcggcagagaaggcactgcgctcctttgtc
cagttccccaacgcctccgaagcgcacctggctatgggccggacactgacagtcaacaca
gacttcacgtccgaccaggccgacttcccagacatgctcttcaacgggtttgagacgcct
gcaccgcccgaggactccttttacctgggctccaatggcagcagctccttaaactcactg
ggagagtactccatgccttccacgccaggtgctaatctagcccaggccttgttgccccct
ccctcgtccttcacctcgccctcgagcggcaagaaccctgtcatgatcctcaacgagctg
aggccaggcctcaagtatgactttgtatccgagagcggcgagagccatgcaaagaacttt
gtcatgcaagtgttggtggactcgcagcagttcgaaggctctggacgaaacaagaagctg
gccaaggcccgggctgcccaggcagccctctcagccctcttcaacatgcagctggaccag
acgccttcccaacagcccatccccagagagggactgcagctccacctaccccaggtcctc
gccaacgcagtctctcgcctggttgtggacaagttcagcgagctgacggacaacttcacc
tccccccacgcgcggcggaaagtcctggcaggggtcgtcatgacaacaggcacggacgtg
aaagaggcccaggtgatctgtgtctccacgggcaccaagtgcatcaacggcgagtacatg
agtgaccgcggcctggcgctcaacgactgccacgcagagattatcgcccgccgctcgctc
atccggtacctctacgcccagctggagcacttcctaagcaacaacaaggaggagcagcag
aagtctatattcatgcgctgcgacaagcgtggctaccgactaaaggacaacgtccagttc
cacctctacatcagcacctcgccctgcggagacgcacgcatcttctcgccgcacgaggcc
ggcatggaagaccaaggcgaccgacaccccaaccggaaggcgcggggccagctgaggacc
aaaatagagtctggggaggggaccatccctgtgaggaccagcaacaccatccagacatgg
gacggggtgctgcagggagagaggctgctcaccatgtcctgcagtgacaagatcgcaaga
tggaatgtggtgggcatccagggctctcttatgagctacttcacagagccaatctacttc
tccagcatcatcctgggcagcctgtaccacggcgaccacctctcccgggctatgtaccag
cgcatcgccgacatcgaggacctgccccaacagttcagcctcaacaggcctctactgagc
ggcatcagcaacgcggaggcgaggcagcctggcaaggcgcccaacttcagcgtgaactgg
gcagtgggcgaccaggcactggaggtcatcaacgctaccacgggcaaagacgacatgggg
cgcgcctcgcgcctctgcaagcatgccctctacagccgctggattcgcctgcactccaag
ctgtcatccacactgaggatcaaggtgtccaagcccagctcgtaccatgatgccaagcag
gcagcggtggagtaccacaacgccaagcagacgctcatcaaggtcttccacaagtcgggc
ctgggggcctgggtgaagaagcccatcgagcaggaccagttctccctcaactcctga
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