KEGG   Coregonus clupeaformis (lake whitefish): 121536651
Entry
121536651         CDS       T08357                                 
Name
(RefSeq) integrin beta-2
  KO
K06464  integrin beta 2
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04145  Phagosome
cclu04514  Cell adhesion molecule (CAM) interaction
cclu04517  IgSF CAM signaling
cclu04518  Integrin signaling
cclu04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    121536651
   04517 IgSF CAM signaling
    121536651
   04518 Integrin signaling
    121536651
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    121536651
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    121536651
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121536651
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121536651
   04515 Cell adhesion molecules [BR:cclu04515]
    121536651
   04090 CD molecules [BR:cclu04090]
    121536651
Membrane trafficking [BR:cclu04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    121536651
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121536651
Cell adhesion molecules [BR:cclu04515]
 Integrins
  Integrin beta subunits
   121536651
CD molecules [BR:cclu04090]
 Proteins
  121536651
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail PSI_integrin EGF_integrin vWA_SIBA-E I-EGF_1 EGF_2
Other DBs
NCBI-GeneID: 121536651
NCBI-ProteinID: XP_041699998
LinkDB
Position
23:15964497..15985493
AA seq 777 aa
MYQCVSLLLLLMGRGVLSQKVEVCSKTVINSCSDCIRSGAYCVWCKQLNFTKPGQQEAAR
CDTLAQLLEKGCMERDIINPQNILSVSKNTALSTSTFAKEEPTQLRPQEVNLKLRPGLPR
TFKLDFQRVEGYPVDLYYLMDLSYSMEDDLRSIKSLGNELFKALQGITKQGRIGFGSFVD
KTVLPFTNTNPEKLKKPCADKEQFCQPAFGYRHVLSMTGNEADFKREVDKQRISGNLDSP
EGTLDAIMQAAVCGDRIGWRNSSTRLIVLTTDDGFHMAGDGKLAGILEPNDERCYMDNQL
YSKSNYMDYPSVGQVASQLEKNNIQPIFAVTKNMENVYRELSRMIPKSEVGVLSEDSKNV
VELIEAAYNRLSSKVTVTHDALPDNVRVTYTPLCPGGGPAGDKGVCDNVKVGQMVSFNVT
VTADECIDGELSFLIGPLGIKDKLKVNLSTRCECDCDDPQEDNHPYCNGKGKVNCGMCSC
KAGFVGQKCECSIGEKDESSLRAACRKDNGTECEGRGDCVCGICQCYALQGGSTYYGTHC
ECENESCEKFQNKLCGGNGKCRCKNCECNPDYEGTACQCKKSDEQCRTPGGSVCSGRGTC
QCNQCKCIEGYQRPYCLTCPACLTPCITKGKCIECLGFQTGPFSKNCSQTCKSINEFEMV
ETLPPGKPCDVRDVENCRVFFTIKQLDGEDNYSAQILKTRECPELPNIYAIIGGSIVVVA
MIGFLILLLIKGLIHMNDLKEFRKFENEKKKSKWAKGENPLFNSATTTVANPTFTGE
NT seq 2334 nt   +upstreamnt  +downstreamnt
atgtatcagtgtgtgtctctcctactcctgctgatgggcagaggtgtgctctcccagaaa
gtggaagtatgttccaaaacagtgatcaactcctgcagcgactgcatcagatcaggagcg
tactgcgtgtggtgcaaacaactgaacttcaccaaaccagggcagcaagaagcagctcgc
tgtgacaccttggctcagctattagagaagggctgcatggaaagagacatcatcaacccc
cagaatatccttagtgtgtctaagaacaccgccctgtccaccagtacatttgccaaggag
gaacccacccagctgcgtcctcaggaggtcaatctgaagctcagaccagggctgcctcgg
acgttcaagctggactttcagagagtggagggctatcctgttgatctctattacctgatg
gatctctcctactccatggaggatgatctgaggagcatcaagtctctgggaaacgagctc
tttaaagctctgcaaggcatcacaaaacaagggcgaataggcttcggctcttttgtagac
aagactgtcctgcctttcactaacaccaacccagagaagctgaagaagccatgcgccgac
aaggagcagttctgtcaacctgcctttggctacaggcatgttcttagcatgacagggaac
gaagctgactttaagagggaggtagacaagcaacgcatctctgggaacttggactcccct
gaagggacgctggacgccatcatgcaggctgcagtctgtggggacaggattggctggagg
aatagcagcacccggctaatcgtcctgaccaccgatgatggcttccacatggcaggggat
ggcaagctggctggcatactggagcccaatgatgagagatgttacatggacaaccaactg
tacagcaagagcaattacatggactacccatctgttggtcaagtggcttcacagttagag
aagaacaacattcagccaatctttgctgtgacaaagaatatggagaatgtatacagggaa
ctcagtagaatgatccccaagtctgaggtgggagtactgtctgaggactccaaaaatgtt
gttgaattgatcgaagctgcctacaataggctctcctccaaagtaacggtgactcatgat
gctctccctgacaatgtgagagtcacttacactccactctgtcctggagggggacccgca
ggggacaagggggtctgtgacaacgttaaagtaggacagatggtgtctttcaacgtaaca
gtgacggcagatgaatgtatagatggagagctgtcttttctgattggcccattgggtata
aaagacaagctgaaggtgaacttgtcgactcgctgcgagtgtgattgtgatgacccccag
gaggacaatcacccatactgcaacgggaagggcaaagtcaactgtggcatgtgcagttgc
aaagccggcttcgtgggccagaagtgtgagtgctccattggggagaaggatgagagctct
ctgagggcggcatgccggaaggacaacggcacggagtgcgaaggacgaggggactgtgtg
tgtggcatatgccagtgctatgccctacaaggcggcagcacctactacggcacgcactgc
gagtgtgaaaacgagagctgcgagaagttccagaacaaactgtgtggagggaacgggaaa
tgccgttgtaaaaattgcgaatgcaaccctgattacgaaggcaccgcctgccaatgcaag
aagtcggacgagcagtgtcgcacaccaggcgggagtgtgtgcagcggcaggggcacatgc
cagtgtaaccagtgcaagtgtatcgagggctaccagcggccctactgtctgacctgcccc
gcctgcttgaccccctgtataaccaaggggaaatgcatcgagtgtctgggctttcagaca
ggcccgttcagtaagaactgctcccagacctgtaagagtattaatgaatttgagatggtg
gaaacattgccacctggtaagccttgtgacgtgagggatgtggagaactgccgggtgttc
tttaccattaaacagttggatggagaggacaactactccgcccagatactaaagaccaga
gagtgtcccgagttgccaaacatctacgccatcattggaggctccattgtggtagtggcc
atgatcggctttctgatcctgctcctcatcaaaggcttaatccacatgaatgacctgaag
gagttccgcaagtttgagaatgaaaaaaagaaatccaagtgggcaaagggagagaatcca
ctattcaacagtgcgaccaccaccgtggctaaccctaccttcactggagaataa

DBGET integrated database retrieval system