Coregonus clupeaformis (lake whitefish): 121536726
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Entry
121536726 CDS
T08357
Name
(RefSeq) aryl hydrocarbon receptor-like isoform X1
KO
K09093
aryl hydrocarbon receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121536726
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
121536726
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
bHLH_HIF1A
PAS_4
PAS_9
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
121536726
NCBI-ProteinID:
XP_041700118
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All DBs
Position
23
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AA seq
1001 aa
AA seq
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MYAGRKRRKPVQRAVKQPPSEGAKSNPSKRHRDRLNGELERLASLLPFPEEVTTSLDKLS
ILRLSVSYLRAKNFFTVALKNCTCKRELANGDSDDNGKATGLADSWLPEGELLLQALNGF
ILVVTNDGTIFYSSHTIQDYLGFHQTDVMHQSVYELVHTEDQQELRRNLHWALNPPDIVA
PEAPLGETPSDAEPDSSTSATVTYNPEQLPPENSSFLERNFVCRFRCLLDNSSGFLALSL
QGRLKFLHGQNQRQDNGDKVPPQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFTPMA
CDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMMKTGESGLTVFRLLTKDNC
WKWVQANARLVYKNGKPDYIIATQRPLVEEEGGEHLRKRSMHLPFTFATGEALLYQSNHP
IVRFNNGAQGSENNGSKSKKGRTDRVSRDGLDPGSLLGALMSQDQSVYICQPALESKLSF
HSSLFGDRVGFSDSDPTALLQGWDESSNGVVGPGLPEPASSFDPLLATLDSLSLGSQGGV
VDGEGDGGNGEACSNGELFGALESLGLSAEDLELLLLDERMIQVEMDPERVPTLDDLLTN
DEILSYIHDSLEAKTDTAEDRGQVPSTIPATTAPITMTTTTKAPVESNPTSATNVLSQYL
HHKSPLVGQAPIVQLSQQMQQHLSMRPGMVVQDWAQHNNHMPHPVVHGLQGQSQPINNGQ
WTSQHILASAGVPVDHCHTPQSLLNGKTSEPDGDLHRRQANQHYLRQQHQQQAMVQSQLP
LCHAKQPDANLNGVYGIPNTHTEHHPAGKQQWQDYSYSHPGETTLNSNPCLSNGHIPPLT
HTTVDACMDFTMADNPGVDYTINECSYGGNGQDQRTEAAVSSFQRMNHKQQQQQEQLPPP
LTQVLSSLSQCPPPNATLEQILGVGQSYRQLPSLEAYGMMTSDIPHDPNHSKMENGCILN
GTYSGGCVLPNGNGVVSSNGLLPCPDTLSSLPDAQASGFYL
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtatgctggacgtaaaaggagaaaaccagtccagagagcggtgaaacagcccccatca
gaaggggccaagtcaaacccctccaagcgccaccgggaccgtctaaatggagagctggag
aggctggccagcctcctacccttcccagaggaggtcaccaccagcctggacaaactctcc
atcctccgccttagtgtcagctacctccgggccaagaacttcttcactgtagccctgaag
aactgtacttgcaagagagagctggccaatggtgatagcgatgacaacggcaaagccacg
ggattggcggacagttggctgcctgaaggcgaactcttgctgcaggcgctgaacggcttc
atcctggtggtcactaatgatgggaccattttttactcctctcacaccatccaggattac
ctgggcttccaccagactgatgttatgcaccagagtgtgtatgagttggttcatactgag
gaccagcaggagctgaggaggaacctccactgggccctcaacccacctgacatcgtggcc
cccgaggccccactgggagagaccccctcagatgcggagccggacagcagcaccagtgcc
actgtgacctacaaccctgagcagctccccccagagaactcctcctttctggaaagaaac
tttgtgtgtcgcttccgctgcctcctggacaactcctctggcttcttggccctgagtctg
cagggcaggctgaagttcctgcacggtcagaaccagcggcaggataacggggacaaggtg
cccccccagctggccctgtttgccattgctacgcccctccagcccccctccatcctggag
atcaggaccaagaacatgatcttcagaaccaaacacaagctggacttcacccccatggca
tgtgacgcaaaggggaaaattgtgcttgggtatactgaagctgaacttcgggtgcgaggc
tccggctatcagtttatccatgcagcggatatgttgtactgcgctgagaaccatgtccga
atgatgaagacaggagagagcggtctgaccgtgttcaggctcctcaccaaggacaactgc
tggaagtgggtccaggccaatgccaggctggtctacaagaacggcaaaccagactacatc
atcgccacgcagaggcctctggtggaggaggaaggaggcgagcacctacgtaaacgttcc
atgcacctccccttcaccttcgcgacgggagaggccctgctctaccagtccaaccatcca
attgtacgcttcaacaacggtgcccagggctctgagaataacggcagcaagtccaagaag
ggacggactgacagggtctccagggatggcctggacccaggctccctcttgggggcgctg
atgagtcaggatcagtctgtgtacatctgccagccggccctggagtccaagctgtccttc
cacagcagtctgtttggggaccgagtcggcttctctgactccgaccccactgccctgctc
cagggctgggatgagtcatccaatggagtagtgggtccgggtcttccagagccggcgtcg
agcttcgacccactgctggcgaccctagactccctgtccctggggagtcaggggggtgta
gtggacggggaaggggacggaggcaacggggaggcctgttccaacggggagctttttggg
gctctggagagcctggggctgagtgccgaggacctggagctgctgctgctggacgagagg
atgatccaggtggagatggaccctgagcgggttcctaccctggatgacctgctgaccaac
gacgaaatcctctcctatatccacgactccctggaggcaaagacagacacggcagaggac
aggggccaggtgccctccactatcccagctacaactgccccaataacgatgacgacaaca
acaaaggcacctgttgaaagtaatcccacttctgccaccaatgtgctctctcaatacctt
caccataagtctcccctggtggggcaggcacccatagttcagctctcccagcagatgcag
cagcacctcagcatgcggccagggatggtggtccaagactgggcccagcataacaaccac
atgccccaccccgtggtgcatggactacaggggcagagtcagcccataaacaatggacaa
tggacatcccagcacattctagccagtgcaggggtcccagttgaccactgtcacaccccc
cagtctctgttaaatggaaagacgtcagagccggatggggatcttcaccggcggcaagcc
aaccaacactacctccggcagcagcatcaacagcaggccatggtccagagccagctccct
ctgtgccatgccaaacagccagacgccaatctcaatggagtgtatggcattccaaacaca
cacacagagcatcacccagctggtaaacagcagtggcaggactacagctacagccaccct
ggggaaaccaccctgaacagcaacccctgcctcagcaatggccacataccccccctcaca
cacaccaccgtagacgcttgtatggatttcactatggctgataatcctggcgtggattat
accatcaacgaatgctcgtatggggggaacgggcaggaccagaggacagaggctgccgtt
tcatccttccagaggatgaaccacaagcaacagcagcagcaggagcagctgccccctccc
ttgacccaggtgctgtccagcctctcgcagtgccctccgccaaatgctaccctggagcag
atcctgggggttggacagtcctacagacagctgccctcactggaggcctacggcatgatg
acctctgacatccctcacgaccccaaccacagtaagatggaaaatggctgcattcttaac
gggacctactcaggaggctgtgttctgcccaatgggaatggtgtggtgtcctctaacggc
ctgctcccctgcccagacactctatccagcctccctgatgcccaggcctcaggcttttac
ctctga
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