Coregonus clupeaformis (lake whitefish): 121536736
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Entry
121536736 CDS
T08357
Symbol
slc15a1a
Name
(RefSeq) solute carrier family 15 member 1
KO
K14206
solute carrier family 15 (oligopeptide transporter), member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121536736 (slc15a1a)
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC15: Proton oligopeptide cotransporter
121536736 (slc15a1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PTR2
DUF4397
Motif
Other DBs
NCBI-GeneID:
121536736
NCBI-ProteinID:
XP_041700158
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Position
23:complement(22699280..22706726)
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AA seq
718 aa
AA seq
DB search
MTDEEGVKKVKSKEVCGYPLSIFFIVVNEFCERFSYYGMRAVLVLYFRYFLRFDDDLATS
IYHTFVALCYLTPILGAIIADSWLGKFKTIIYLSIVYAIGQVVMAVSAVHDITDTDRDGT
PDNLTLHIVLSMVGLLLIALGTGGIKPCVAAFGGDQFQDHQAKQRSTFFSVFYLCINGGS
LLSTIITPILRGQECGIHSQQKCYPLAFGVPAALMVVALVVFIIGSGMYHKTEPQGNIML
DVCKCIGFAVKNRFRHRSSSYPKRTHWMDWAEEKYEKLLIAQIKMVLKVLFLYIPLPMFW
TLFDQKGSRWTLQATTMDGNFGFLILQPDQMQTVNPILILTLVPIMDSVVYPLIKKCGLN
FTPLRRMTVGMFFAAMAFVAAALVQIQIDKTLPTFPSSSQSQLKLLNMGSNPLNVTLPNN
DPLMIEAAQASANYLTFEEESIKVSFQNPAISRTISLAKEKRQTLLIPSNLSAPMWEVTD
DLMAKPEQGANAIRFVNGMAGAVNVSTFGTIDYSSASNYSLISNGKTTFTITSGANTCEY
SREFGFGSSYTILIPSDFSWGVSCWESISVVEDIQPNSFHMGWQIPQYFLITCGEVVFSV
TGLEFSYSQAPSNMKAVLQAGWLFTVAIGNFIVLIVAEIAQIEEQWAEFILFASLLVAVC
VIFSIMAYFYTYIDPVEIEAQFRDKGSKEESDKEELQMQKKDSIAHHNEDDEPKHTKM
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgaagagggtgttaagaaggtcaagtcaaaggaagtctgtggctatcccctc
agcatattcttcattgttgtaaatgagttctgcgagagattctcctactatggcatgcga
gctgtgctggtgctgtacttcaggtacttcctccggtttgatgatgacctggccacctcc
atctaccacacctttgtggctctgtgctacctgactcccatcctgggagccattatagca
gactcctggctgggcaagtttaagaccatcatctacttgtccattgtctatgcaattggc
caggttgtgatggcagtcagcgccgttcatgacatcacggacacagacagagatggaacg
ccagacaacttgaccttgcatattgtgttgtccatggtgggcctgctgctcattgcgctg
ggtacaggtggtatcaaaccatgtgtagctgcttttggaggagaccagtttcaggaccac
caggcgaaacagaggagcactttcttctctgttttctacctgtgtatcaatggtgggagt
ctcctgtctactatcatcacaccaatcctcagaggccaggagtgtggcatccacagccag
cagaagtgttaccctctggcatttggtgtccctgctgcgctcatggtggtcgcccttgtc
gtgttcataattggaagtggtatgtaccataagactgaaccgcagggaaacattatgctg
gatgtttgtaaatgtattgggtttgcagtaaagaaccgcttcaggcacaggagtagctcc
tacccgaagagaacgcactggatggactgggccgaagagaaatatgagaaactcctcatt
gctcagataaagatggtgctgaaggtcttatttctgtacattccccttcccatgttctgg
accctatttgaccaaaagggctctaggtggactcttcaggccaccaccatggatgggaac
tttgggttcctcattctgcagcctgatcaaatgcagactgtcaaccccatcctgatcctg
actctggtacctatcatggacagtgtggtgtacccactgataaagaaatgtggcctgaac
ttcactcctttgaggagaatgacagtggggatgttttttgcagctatggcctttgttgct
gcagctttggtacagatccagattgataaaaccttgccaaccttcccttcatcctcccag
agccaattaaaattactcaacatgggcagtaaccccttgaatgttaccctacccaataat
gatcccttaatgattgaagcagctcaggctagtgcaaattaccttacatttgaagaagaa
agcatcaaagtttcatttcagaatcctgcaatatctaggactatttccttagcaaaggaa
aagcggcaaacacttctaatcccctcaaacctcagtgccccaatgtgggaggtgactgac
gatttgatggcaaagccagagcaaggggccaatgcaatcagatttgttaatgggatggct
ggagcggtgaatgtgtcaacttttggaaccattgactactcctctgcttccaactactct
ctcatatcaaatggaaaaaccaccttcaccattaccagtggtgcaaacacatgtgaatac
tccagagaatttggattcggaagttcttacactatccttatacccagtgatttctcatgg
ggcgtgagttgctgggaatccatttctgtggttgaggacatccagcccaactccttccat
atgggctggcagatcccacagtacttcctcattacctgtggagaggtggtgttctctgtt
actggcctggagttctcttactcacaggcaccgagcaacatgaaggcagtgctgcaagca
ggctggctgttcactgtagctattggcaactttattgtgcttattgtggctgagattgca
cagatcgaagaacagtgggcagagtttatcctcttcgcctccctcctagtggcagtgtgt
gtcatcttctccatcatggcctatttctatacctacatagaccctgtagagatcgaggcc
cagttcagggacaaaggcagtaaggaagaatcagacaaagaggagcttcaaatgcagaag
aaagattccatagcccatcacaatgaagatgatgaacccaaacacaccaaaatgtaa
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