Coregonus clupeaformis (lake whitefish): 121536737
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Entry
121536737 CDS
T08357
Name
(RefSeq) glypican-6-like
KO
K08112
glypican 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cclu00535
]
121536737
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
121536737
Proteoglycans [BR:
cclu00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
121536737
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
Others
121536737
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GFIT
Motif
Pfam:
Glypican
Serglycin
DUF5856
Motif
Other DBs
NCBI-GeneID:
121536737
NCBI-ProteinID:
XP_041700160
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Position
23:complement(23389636..23494093)
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AA seq
559 aa
AA seq
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MLRIQTVLWTFSLLSVAAGSDFKARNCSGVREASIAKGFSFENVPLQQMSGDHLRVCPQG
NTCCSSEMEDKFGQQSKLELENMVDETSNELRSTFVSRHKKFDEFFLELLENTERSLNEM
FVRTYGKPYMQNSEVFQNLFAELKRYYTGGNVNLEEMLNDFWSRLLERMFTMLNSQYIIT
DDYLECISKYTDQLKPFGDVPRKLKAQVTRAFIAARTFVQGLSVGREVANRVSKVSSTPA
CIRALTKMMYCQYCQAMPSVKPCNNYCLNVMKGCLANQADLDPEWNQYIDAMLLVAQRLE
GPFNIESVMEPIDVKISEAIMNMQDNSVQVSYRVFQGCGQPKPSGMGGRSTRGVSDVFNA
RFRPYSPEERPTTAAGTSLDRLVIDIKEKLKLFKKLWSNLPEDICQPHRVTAGNATDDDQ
CWNGHTKGRYFPEVMKDGLTNQVNNPEVGVDITRPDTFIRQQIMALRVMTNKLKNAYNGN
DIYFQDSSDEGSGSGSGSGCTEACVTEFVFASTEAPVVGADRSGSGPVEDSAAATHPAPS
AALPASLALSALVLHRLWR
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgctgagaatacagaccgtcctttggactttctcattgctgtctgttgcagctggatca
gattttaaagcacgtaactgcagtggggttagagaagcttctattgcaaaaggcttcagc
tttgaaaatgttcctctccaacaaatgtcaggtgaccatctccgggtatgtccccagggc
aatacctgttgcagctcagaaatggaggacaagtttggccaacaaagcaagctggagtta
gagaacatggttgatgaaacaagtaatgaactacgaagcaccttcgtctccagacataaa
aagtttgatgagttcttcctggagctgctggagaacacggagaggtccctgaacgagatg
ttcgtgcggacatatggcaagccttacatgcagaactcagaagtcttccagaacctgttt
gctgagctgaagcgctactacactggaggcaacgtgaacctggaggagatgctcaatgac
ttctggtcgcggctgctggagcgcatgttcacgatgctcaactcccagtacataatcaca
gatgactatctggagtgcatcagcaagtacacagaccagctcaaaccctttggagacgtg
cccaggaagctcaaggctcaggttaccagggccttcattgcggcccgcaccttcgtccag
ggcctctcggttggtcgagaggtggccaacagggtgtccaaggtgagcagcaccccagca
tgtatccgagcactgaccaagatgatgtactgccaatactgccaagccatgccctctgtg
aagccctgtaacaactactgtctgaacgtgatgaagggctgtctcgccaaccaggccgat
ctggacccagagtggaaccagtacatcgatgccatgttgctggtggcacagaggctggag
ggacccttcaacattgagtctgtcatggaacccattgatgtcaagatttcggaggccatc
atgaatatgcaagataacagcgtccaggtctcctacagggtttttcaaggctgcggccaa
ccaaagccctcaggaatgggcggcaggtctacccggggcgtctcggatgtgttcaacgcc
cgcttcaggccctacagcccagaggagcggcccaccactgcagctggcaccagcctggac
agactggtgattgacatcaaggagaaactgaagctgttcaagaagttgtggtccaaccta
cctgaggacatctgccagccacacagggtgacagcagggaatgccactgatgacgaccag
tgttggaatgggcacaccaagggcaggtatttcccggaggttatgaaagacggattgacc
aatcaggtgaataacccagaggtgggcgtggacatcaccaggccggacacgttcattcgc
cagcagatcatggctctgagagtgatgacaaacaagttaaaaaatgcctacaatggcaat
gatatctactttcaagactcaagtgacgagggcagtggctcgggcagtggcagcggctgc
acagaggcctgcgtcactgagtttgtctttgccagcaccgaggcaccggtggtgggagcg
gaccggagcgggagtggaccagtggaggattcagcagcagccacacaccctgccccctca
gcagccctgccggccagcctggctctctcagccctggtactgcacaggctatggagataa
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