KEGG   Coregonus clupeaformis (lake whitefish): 121536764
Entry
121536764         CDS       T08357                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A3-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121536764
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cclu03019]
    121536764
   03041 Spliceosome [BR:cclu03041]
    121536764
Messenger RNA biogenesis [BR:cclu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     121536764
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     121536764
Spliceosome [BR:cclu03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    121536764
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_3 OB_RNB PHM7_cyt
Other DBs
NCBI-GeneID: 121536764
NCBI-ProteinID: XP_041700218
LinkDB
Position
23:22251546..22255471
AA seq 383 aa
MRLLFPQIEDEDRIAKGHEAREPEQLRKLFIGGLSFETTEESLRIHFEQWGNLTDSVVMR
DPNNKRSRGFGFVTYSCVEEVDACMAARPHKVDGRVVEPKRAVSREDSNRPGAHLTVKKI
FVGGIKEDTQEDHIREYFESYGRIETIDIMEERATGKKRGFCFVSFDDNDTVDKIVAQKY
HTINSHNCEVRKALPKQEMMEASNQRSRGGGSGNFMGRGGNSGGGNFGQGKSLSHLICGY
IWNSNHTSNVNLVILCVTGGYGGGRGGDGYNGYGGEGGNYSGGPGYRGGRGGGYGGGSPG
YGNQGGGFGGEYDNYNDRGNFRGNFGGGRGGNYNDFGNYGGPQSSYGPMKGNNFGGRNSG
GGPYGGGYGSGGGSGHGYGSQRY
NT seq 1152 nt   +upstreamnt  +downstreamnt
atgagactcctgttcccacaaatcgaagacgaagaccgtattgctaagggacatgaagca
agggagcctgaacagctcaggaagctgttcattgggggcctaagttttgaaaccacagag
gaaagtttaaggatccattttgaacaatggggaaacctcacagacagtgtggtgatgcgg
gacccaaacaacaagcgctcgagagggttcggctttgtaacatactcctgtgtggaggag
gtggatgcctgtatggcagctcgccctcataaggtggacggacgtgttgttgaacctaaa
agggctgtatcgagagaggactctaatagaccaggtgcccacctgacggtgaagaagatc
tttgttggggggatcaaggaggacacacaggaggaccatatcagggagtactttgagagc
tacgggaggattgagaccattgacattatggaagaacgcgcaactgggaaaaagaggggt
ttctgctttgtctcatttgatgacaatgacactgtggataaaattgttgctcaaaaatac
cacacaataaacagccacaactgcgaagtcagaaaagcactcccaaaacaggaaatgatg
gaggcgtccaatcagaggagtaggggtggtggctctggaaacttcatgggtagaggtggc
aactctggtggtggcaactttggtcaaggtaagtccctttcacatttgatatgtggatac
atttggaacagtaatcacaccagcaatgtaaacttagttatcttgtgtgttacaggaggc
tacggtggcggaagaggaggggatggatacaatggatatggaggagagggtggaaactac
agtgggggacctggctacagaggtggacgtggtggcgggtatgggggaggaagtcctggg
tatggaaaccagggaggaggctttggaggagaatatgataactacaatgacagaggcaac
ttcagggggaactttggtggtggaagaggtggaaattacaatgactttggtaactacgga
ggaccgcaatccagctatggccccatgaaggggaacaactttggtggcagaaactctggt
ggtggcccctatggaggtggctatggctcaggcggtggaagtgggcatggctatggctca
cagcgatattga

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