Coregonus clupeaformis (lake whitefish): 121536765
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Entry
121536765 CDS
T08357
Symbol
hoxd3a
Name
(RefSeq) homeobox protein Hox-D3a
KO
K09303
homeobox protein HoxA/B/D3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121536765 (hoxd3a)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121536765 (hoxd3a)
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GFIT
Motif
Pfam:
DUF4074
Homeodomain
DUF7255
Motif
Other DBs
NCBI-GeneID:
121536765
NCBI-ProteinID:
XP_041700221
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Position
23:22096377..22118699
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AA seq
397 aa
AA seq
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MQKATYYDNSGLFGSYSYPKSDSYMYGPTHQPYPTSNLESDYQGPVCPIQTTTVRPPTHK
DNDMNGNCMRPSSSQGNSQQSSIGEQPQAPPLSASSPNSSNTSSQKKKSPPNNASNTATP
VINKQIFPWMKETRSNAKQKSNSSNNCTTAEGESCDEKSPPGPASKRVRTAYTSAQLVEL
EKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGIMHSPIGHSPDR
SPPLSGPNHIGYSVNVNSLSYDAPSPPSFAKPQQNMYGLAAYTAPLGGCIPQQKRYPGSE
YEHHSMQGNGGFANANLQGSPVYVGGNFVDSMPASGPMFNLGHLPHPSSASVDYSCAAQI
PGNHHHGPCDPHPTYTDLTSHHASQGRIQEAPKLTHL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagctacatactacgataattctggactttttggaagctattcttaccccaaa
tccgactcatatatgtatggcccaactcaccagccctaccccacttctaaccttgagagt
gattatcagggtccagtttgtccaatacaaaccacaactgtacggccaccaactcataaa
gacaatgacatgaatggcaactgcatgcgaccaagtagcagccaaggaaacagccaacag
tcgagtattggtgaacagccgcaggcacctccattgtcggcatcttcccctaactccagc
aacacttcatctcagaagaagaaatctcctccaaacaatgcttctaatactgccacccca
gtcattaacaagcaaatattcccatggatgaaggagacgcgatcgaacgccaaacagaaa
agcaacagcagcaacaattgcacaactgcagaaggtgagtcctgcgatgaaaaaagtcca
cctggtccagcctccaaacgggtccgaactgcctacaccagtgcacaacttgtagaactt
gagaaggagttccatttcaaccggtacctgtgtcgtccccgaagagtggagatggctaat
ttattgaatctcactgagcgccaaataaagatctggtttcaaaacagaaggatgaaatac
aaaaaggatcagaaggctaaggggataatgcactctcccatcggacactccccggacaga
agcccaccattaagtggcccaaatcacataggatattctgtaaatgtaaacagcctcagc
tatgatgctccctcgcccccgtcattcgccaaaccccagcaaaacatgtacggcttggct
gcgtacacggcaccattaggtggctgcataccgcaacaaaaaaggtatccgggctccgaa
tatgaacaccacagcatgcaaggcaatggtggctttgccaacgctaatttgcaaggcagt
ccggtgtacgttgggggaaatttcgttgattccatgccagcctcgggccccatgttcaac
ctcggccatctccctcatccctcatccgccagcgtggactacagctgtgccgctcagatt
ccaggcaaccaccaccatggaccctgtgacccccatcccacatatacagacctcacctct
caccatgcgtctcagggaaggattcaggaagcgcctaaactaacgcatttgtaa
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