Coregonus clupeaformis (lake whitefish): 121536793
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Entry
121536793 CDS
T08357
Symbol
gad1a
Name
(RefSeq) glutamate decarboxylase 1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00250
Alanine, aspartate and glutamate metabolism
cclu00410
beta-Alanine metabolism
cclu00430
Taurine and hypotaurine metabolism
cclu00650
Butanoate metabolism
cclu01100
Metabolic pathways
Module
cclu_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
121536793 (gad1a)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
121536793 (gad1a)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
121536793 (gad1a)
00430 Taurine and hypotaurine metabolism
121536793 (gad1a)
Enzymes [BR:
cclu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
121536793 (gad1a)
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
SepSecS
Chlam_OMP3
Motif
Other DBs
NCBI-GeneID:
121536793
NCBI-ProteinID:
XP_041700281
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Position
23:21058087..21071600
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AA seq
586 aa
AA seq
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MAASAPSSSGSEPDPNSTNLRPPGSSYDAWCGVAHGCSRKLGMKICGFLQKNNNLEEKIS
SFKERSSKDLLDNSDRDSRFRRTETDFSNLFARDLLPAKNGEEPTMQFLLEVVDILTNYV
RKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDEPESLEQILVDCRDTLKYGVRTGHPRFF
NQLSTGLDIIGLSGEWLTSTANTNMFTYEIAPVFVLMEQLTLKKMREIIGWPNGEGDGIF
SPGGAISNMYSVMIARYKFFPEVKTKGMTAAPRLVLFTSEHSHYSIKKASAALGFGTENL
ILLSTDERGRVIPADLEAKVIDAKARGCVPMFVNATAGSTVYGAFDPIHEIADICEKYNM
WLHVDGAWGGGLLMSRKHRHKLSGVERANSVTWNPHKMMGVPLQCSAILVRERGVLSGCN
SMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTIGFEQHIDKCLDLSH
YLYTKIKDREGYQMVFDGEPQHTNVCFWYLPPGIRDMPDGQEKRERLHKVAPKIKAMMME
SGTTMVGYQPQGDKVNFFRMVISNPAATRSDIDFLTDEIERLGQDL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtctgcaccttcctcgtctggcagcgaaccggatcccaactcgacaaattta
cgaccaccaggctcaagctatgacgcttggtgtggagttgctcatggatgttctagaaaa
ttgggaatgaagatatgtggatttttgcagaagaacaacaacctcgaggagaagattagt
tccttcaaggaaagatcgtctaaggacctgctggataacagcgacagggattcccgtttc
agacgcaccgaaacagacttttccaatctatttgctagagatttattaccagccaaaaat
ggagaggagccaactatgcagtttttgctggaggtggtggatattctcacaaactacgtc
cggaagacctttgacagatccaccaaagtcctggactttcaccacccccaccagctgctg
gagggcatggagggcttcaacctggagctatccgacgagcccgagtccctggagcagatc
ctggtggactgtagggataccctgaaatatggagtgagaacaggtcaccctaggtttttc
aatcagctatctactggcttagacatcattgggttgtcaggagaatggctcacctccact
gcaaacactaacatgttcacctatgagatcgccccagtcttcgtgctcatggaacagctg
acgctgaagaagatgagggagatcattggctggccaaatggagagggcgatgggatattc
tcaccaggtggagcgatatccaacatgtacagtgtgatgatcgcacgctacaagttcttc
cctgaagtcaagaccaaaggcatgactgctgcccccagactggtgctcttcacctcagag
catagccactactctataaagaaagccagtgctgctctgggctttggaacagaaaacctg
atcctgttgagcacagatgagagagggagagtcattcctgctgatttggaagctaaggtc
atcgatgccaaggcgaggggttgtgtcccaatgttcgtgaatgctacagctggttccaca
gtgtatggagcgttcgatcccatccacgagattgcagacatctgcgagaaatacaacatg
tggctacatgtggatggtgcatggggaggagggctactgatgtccaggaagcacaggcac
aagttgagtggtgtagagagggccaactcagtcacctggaaccctcacaagatgatgggt
gtgccactgcagtgctctgccattctggtcagagagaggggagttttatcaggctgcaac
tccatgtgtgctggctacctcttccaaccagacaaacagtacgatgtatcatacgacaca
ggggacaaggccatccagtgtggacgacatgtagatatctttaaattctggctaatgtgg
aaagcaaagggaacaatagggtttgaacagcacatcgacaagtgcttggacctctcgcat
tatctctacactaaaatcaaggaccgcgagggctatcagatggtgttcgatggagagccc
cagcacacgaatgtctgcttctggtaccttccgccaggcattcgtgacatgcccgatggt
caggagaagagggagaggttgcataaggtggcccctaagatcaaggcgatgatgatggaa
tctggaactaccatggtgggctaccagcctcagggagacaaggtcaacttcttccgcatg
gtcatctccaatcctgccgccaccaggtcagatatcgacttcttgaccgatgagattgag
agactggggcaggacttgtaa
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