Coregonus clupeaformis (lake whitefish): 121536797
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Entry
121536797 CDS
T08357
Symbol
htra1b
Name
(RefSeq) serine protease HTRA1B isoform X1
KO
K08784
HtrA serine peptidase 1 [EC:3.4.21.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121536797 (htra1b)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cclu03110
]
121536797 (htra1b)
Peptidases and inhibitors [BR:
cclu01002
]
Serine peptidases
Family S1: chymotrypsin family
121536797 (htra1b)
Chaperones and folding catalysts [BR:
cclu03110
]
Other chaperones and cochaperones
DegP / HtrA
121536797 (htra1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
Trypsin
IGFBP
PDZ_6
PDZ_2
PDZ
Peptidase_S46
Kazal_2
Kazal_1
Peptidase_S32
Kazal_CFAI
GRASP55_65
Motif
Other DBs
NCBI-GeneID:
121536797
NCBI-ProteinID:
XP_041700330
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All DBs
Position
1:complement(18397764..18438230)
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AA seq
511 aa
AA seq
DB search
MQIKHILVETFENTFFDNFVNFLIIKFLTMFWSVICATFLISPLVCEARTKRYVIGCPDK
CDKSLCPPIPADCLAGDILDQCDCCPVCASEEGEACGGTGRLGDPECGEGMECSITDGIG
VSATVRRRGKSGVCVCKGSDPVCGSDGVSYQNICELKRVSNRALKLQQPPVIFIQRGTCG
KGQENPDSLRHRYNFIADVVEKIAPAVVHIELYRKMVFSKREVAVASGSGFVVSEDGLIV
TNAHVVANKHRVKVELKSGATFDAKIKDVDEKADIALIKIDVPMKLPVLLLGRSADLRPG
EFVVAIGSPFSLQNTVTTGVVSTTQRGGKELGLRNSDMDYIQTDAIINYGNSGGPLVNLD
GEVIGINTLKVTAGISFAIPSDKIRQFLAESHDRQSKGTDYQSKGKLSSSKKYIGVRMMT
LTPMLAKELKERQSDFPDVTSGAYVIEVIPKTPAETGGLQESDVIITINSQRITSASDVS
SSIKREDTMRMVVRRGNEDIMLTVVPEEIDP
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcagataaaacatattttggtagaaacttttgaaaatacgttttttgacaactttgtt
aattttttgataattaaatttttaacaatgttttggtccgtcatctgcgcaacttttctc
atttctcctttagtttgcgaggcaagaaccaagcgatatgtcatcggctgtccagataaa
tgtgacaaatctctatgtcccccgatccctgcggactgcctggccggcgacatacttgac
caatgcgactgttgtccggtctgtgcgtccgaagagggtgaggcatgcggcggcacgggg
agattaggggacccggagtgcggagagggcatggaatgctcgatcacggacggaattggg
gtgtccgccacagtgaggcgtcggggcaaaagcggtgtgtgcgtctgtaaaggttcggac
ccggtgtgcggcagtgacggggtgtcctaccaaaacatctgcgaactgaagagagtgagt
aatcgggctctgaagctgcagcagccaccagtcatcttcatacagagaggaacctgtggc
aaaggccaggagaatccagacagtctgcgccacagatacaactttatcgctgatgtggtt
gagaagattgctcctgctgtggttcatattgaactgtaccgaaagatggtgttctctaag
cgggaggtggcagtggccagcggctctggcttcgtggtgtcggaggacggcctgatcgtg
accaatgcccacgtggtggccaataagcaccgggtgaaggtggagctgaagagtggcgcc
accttcgacgccaagattaaagatgtggacgagaaggccgacatcgccctcatcaagatc
gacgtcccgatgaagctgccggtgctgctgctgggtcgttcagctgacctgaggcctggt
gagtttgtggtggccatcggcagccccttctccctgcagaacacggtcaccacaggtgtc
gtcagcaccacccagagaggaggcaaggagctgggcctgaggaactctgatatggattac
atccagacggacgctatcatcaactatgggaactctggcggaccactggtcaatctggac
ggagaggtgattgggatcaacacactgaaggtgacagcaggaatctccttcgccatcccc
tcagacaagatccgtcagttcctggcagagtcccatgacagacaatctaaaggtacagat
taccaatctaaaggtaaattatcatcaagtaagaaatatattggtgtgaggatgatgact
ctcactccaatgcttgcaaaggagctgaaggagagacaatcagacttccccgatgttacc
tcaggggcatacgtcatcgaggtcatcccaaaaacaccagctgagacaggtggcctgcag
gagagtgatgtcataatcaccatcaacagccagcgaatcacctcggccagtgatgtcagc
agctccatcaagagggaagacacgatgcggatggtagtccggcggggaaacgaggacatc
atgctcaccgtcgtcccagaggagattgacccttga
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